RNA–Protein interactions for RNA: ENST00000554034.5

CDH24-205, Transcript of cadherin 24, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH24, Length 2,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-205ENST00000554034 NISCHQ9Y2I1 1504 aa37.9■■■■□ 3.66
CDH24-205ENST00000554034 SHROOM4Q9ULL8 1493 aa33.19■■■□□ 2.9
CDH24-205ENST00000554034 SUPT5HO00267 1087 aaKnown RBP32.7■■■□□ 2.83
CDH24-205ENST00000554034 ZCCHC6Q5VYS8 1495 aaKnown RBP32.1■■■□□ 2.73
CDH24-205ENST00000554034 DCAF8L2P0C7V8 631 aa31.92■■■□□ 2.7
CDH24-205ENST00000554034 MYO15BQ96JP2 1530 aa31.83■■■□□ 2.69
CDH24-205ENST00000554034 CHIC1Q5VXU3 224 aa31.76■■■□□ 2.68
CDH24-205ENST00000554034 CCDC180Q9P1Z9 1646 aa31.75■■■□□ 2.67
CDH24-205ENST00000554034 HRCP23327 699 aa31.46■■■□□ 2.63
CDH24-205ENST00000554034 PCGF6Q9BYE7 350 aa31.4■■■□□ 2.62
CDH24-205ENST00000554034 PPARGC1BQ86YN6 1023 aaKnown RBP31.1■■■□□ 2.57
CDH24-205ENST00000554034 LOC105371045A0A1W2PR82 267 aa31.08■■■□□ 2.57
CDH24-205ENST00000554034 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
CDH24-205ENST00000554034 TRIM26Q12899 539 aaPredicted RBP30.43■■■□□ 2.46
CDH24-205ENST00000554034 ABCC9O60706 1549 aa30.37■■■□□ 2.45
CDH24-205ENST00000554034 FAM9AQ8IZU1 332 aaPredicted RBP30.3■■■□□ 2.44
CDH24-205ENST00000554034 SCRIBQ14160 1630 aa30.29■■■□□ 2.44
CDH24-205ENST00000554034 EHMT2Q96KQ7 1210 aa30.27■■■□□ 2.44
CDH24-205ENST00000554034 RSF1Q96T23 1441 aaPredicted RBP30.26■■■□□ 2.44
CDH24-205ENST00000554034 TRIM41Q8WV44 630 aa30.23■■■□□ 2.43
CDH24-205ENST00000554034 RB1CC1Q8TDY2 1594 aa30.08■■■□□ 2.41
CDH24-205ENST00000554034 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
CDH24-205ENST00000554034 ZEB1P37275 1124 aaPredicted RBP29.77■■■□□ 2.36
CDH24-205ENST00000554034 MROH2BQ7Z745 1585 aa29.63■■■□□ 2.33
CDH24-205ENST00000554034 WIZO95785 1651 aa29.5■■■□□ 2.31
CDH24-205ENST00000554034 NACADO15069 1562 aa29.49■■■□□ 2.31
CDH24-205ENST00000554034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.42■■■□□ 2.3
CDH24-205ENST00000554034 SCAF1Q9H7N4 1312 aaKnown RBP29.39■■■□□ 2.3
CDH24-205ENST00000554034 TTBK1Q5TCY1 1321 aaPredicted RBP29.36■■■□□ 2.29
CDH24-205ENST00000554034 CCER1Q8TC90 406 aaPredicted RBP29.26■■■□□ 2.27
CDH24-205ENST00000554034 BAZ1AQ9NRL2 1556 aaPredicted RBP29.15■■■□□ 2.26
CDH24-205ENST00000554034 ABCC8Q09428 1581 aa29.11■■■□□ 2.25
CDH24-205ENST00000554034 EIF4G1Q04637 1599 aaKnown RBP29.08■■■□□ 2.25
CDH24-205ENST00000554034 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
CDH24-205ENST00000554034 SOGA1O94964 1423 aa28.92■■■□□ 2.22
CDH24-205ENST00000554034 NEUROD1Q13562 356 aa28.91■■■□□ 2.22
CDH24-205ENST00000554034 CEP162Q5TB80 1403 aa28.89■■■□□ 2.22
CDH24-205ENST00000554034 DIEXFQ68CQ4 756 aaKnown RBP28.86■■■□□ 2.21
CDH24-205ENST00000554034 TOP2AP11388 1531 aaKnown RBP28.84■■■□□ 2.21
CDH24-205ENST00000554034 ACIN1Q9UKV3 1341 aaKnown RBP28.84■■■□□ 2.21
CDH24-205ENST00000554034 PELP1Q8IZL8 1130 aaKnown RBP28.84■■■□□ 2.21
CDH24-205ENST00000554034 UBTFP17480 764 aaKnown RBP28.81■■■□□ 2.2
CDH24-205ENST00000554034 RUSC2Q8N2Y8 1516 aa28.8■■■□□ 2.2
CDH24-205ENST00000554034 UNC13AQ9UPW8 1703 aa28.79■■■□□ 2.2
CDH24-205ENST00000554034 SMARCA2P51531 1590 aa28.78■■■□□ 2.2
CDH24-205ENST00000554034 SMARCA4P51532 1647 aa28.77■■■□□ 2.2
CDH24-205ENST00000554034 WRNQ14191 1432 aaPredicted RBP eCLIP28.76■■■□□ 2.195e-6■■■■■ 29.2
CDH24-205ENST00000554034 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.19
CDH24-205ENST00000554034 CSRNP3Q8WYN3 585 aa28.71■■■□□ 2.19
CDH24-205ENST00000554034 TNIKQ9UKE5 1360 aa28.68■■■□□ 2.18
CDH24-205ENST00000554034 GTF3C3Q9Y5Q9 886 aa28.66■■■□□ 2.18
CDH24-205ENST00000554034 CENPBP07199 599 aaPredicted RBP28.54■■■□□ 2.16
CDH24-205ENST00000554034 HNRNPUL2Q1KMD3 747 aaKnown RBP28.52■■■□□ 2.16
CDH24-205ENST00000554034 YTHDC1Q96MU7 727 aaKnown RBP28.47■■■□□ 2.15
CDH24-205ENST00000554034 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
CDH24-205ENST00000554034 GOLGA3Q08378 1498 aa28.46■■■□□ 2.15
CDH24-205ENST00000554034 ZNF316A6NFI3 1004 aaPredicted RBP28.45■■■□□ 2.14
CDH24-205ENST00000554034 RANGAP1P46060 587 aaPredicted RBP28.45■■■□□ 2.14
CDH24-205ENST00000554034 EEA1Q15075 1411 aa28.45■■■□□ 2.14
CDH24-205ENST00000554034 SYNJ1O43426 1573 aa28.28■■■□□ 2.12
CDH24-205ENST00000554034 CLIP1P30622 1438 aa28.26■■■□□ 2.11
CDH24-205ENST00000554034 MIER1Q8N108 512 aa28.26■■■□□ 2.11
CDH24-205ENST00000554034 CEP164Q9UPV0 1460 aa28.23■■■□□ 2.11
CDH24-205ENST00000554034 RAPGEF2Q9Y4G8 1499 aa28.14■■■□□ 2.1
CDH24-205ENST00000554034 APLP2Q06481 763 aa28.14■■■□□ 2.1
CDH24-205ENST00000554034 VPS8Q8N3P4 1428 aa28.11■■■□□ 2.09
CDH24-205ENST00000554034 KIF21BO75037 1637 aa28.09■■■□□ 2.09
CDH24-205ENST00000554034 PEG3Q9GZU2 1588 aa28.01■■■□□ 2.07
CDH24-205ENST00000554034 ATAD2BQ9ULI0 1458 aa27.99■■■□□ 2.07
CDH24-205ENST00000554034 BAZ1BQ9UIG0 1483 aaKnown RBP27.96■■■□□ 2.07
CDH24-205ENST00000554034 KANK4Q5T7N3 995 aaPredicted RBP27.85■■■□□ 2.05
CDH24-205ENST00000554034 DHX57Q6P158 1386 aaKnown RBP27.77■■■□□ 2.04
CDH24-205ENST00000554034 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
CDH24-205ENST00000554034 ARAP1Q96P48 1450 aa27.71■■■□□ 2.03
CDH24-205ENST00000554034 ITGAEP38570 1179 aa27.7■■■□□ 2.02
CDH24-205ENST00000554034 PRXQ9BXM0 1461 aa27.64■■■□□ 2.02
CDH24-205ENST00000554034 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
CDH24-205ENST00000554034 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
CDH24-205ENST00000554034 CLSPNQ9HAW4 1339 aa27.54■■■□□ 2
CDH24-205ENST00000554034 CUX1P39880 1505 aa27.52■■■□□ 2
CDH24-205ENST00000554034 RRBP1Q9P2E9 1410 aaKnown RBP27.46■■□□□ 1.99
CDH24-205ENST00000554034 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
CDH24-205ENST00000554034 CCNB3Q8WWL7 1395 aa27.44■■□□□ 1.98
CDH24-205ENST00000554034 SUPT16HQ9Y5B9 1047 aaKnown RBP27.44■■□□□ 1.98
CDH24-205ENST00000554034 KCNH8Q96L42 1107 aa27.42■■□□□ 1.98
CDH24-205ENST00000554034 ARHGAP35Q9NRY4 1499 aa27.42■■□□□ 1.98
CDH24-205ENST00000554034 MYT1Q01538 1121 aa27.34■■□□□ 1.97
CDH24-205ENST00000554034 NCAPD3P42695 1498 aa27.33■■□□□ 1.97
CDH24-205ENST00000554034 RAB3GAP2Q9H2M9 1393 aa27.32■■□□□ 1.96
CDH24-205ENST00000554034 CUX2O14529 1486 aa27.27■■□□□ 1.96
CDH24-205ENST00000554034 HMGXB3Q12766 1538 aa27.25■■□□□ 1.95
CDH24-205ENST00000554034 P3H3Q8IVL6 736 aa27.23■■□□□ 1.95
CDH24-205ENST00000554034 SIN3AQ96ST3 1273 aa27.23■■□□□ 1.95
CDH24-205ENST00000554034 CFTRP13569 1480 aa27.22■■□□□ 1.95
CDH24-205ENST00000554034 FAM50AQ14320 339 aaKnown RBP27.21■■□□□ 1.95
CDH24-205ENST00000554034 ATP1B4Q9UN42 357 aaPredicted RBP27.21■■□□□ 1.95
CDH24-205ENST00000554034 MAPKBP1O60336 1514 aa27.21■■□□□ 1.95
CDH24-205ENST00000554034 IGF1RP08069 1367 aa27.19■■□□□ 1.94
CDH24-205ENST00000554034 HIRIP3Q9BW71 556 aaPredicted RBP27.17■■□□□ 1.94
CDH24-205ENST00000554034 DDX10Q13206 875 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms