RNA–Protein interactions for RNA: ENST00000309739.5

RND1-201, Transcript of Rho family GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RND1, Length 1,681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND1-201ENST00000309739 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
RND1-201ENST00000309739 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
RND1-201ENST00000309739 ZCCHC6Q5VYS8 1495 aaKnown RBP34.29■■■■□ 3.08
RND1-201ENST00000309739 SHROOM4Q9ULL8 1493 aa33.75■■■□□ 2.99
RND1-201ENST00000309739 DCAF1Q9Y4B6 1507 aa33.6■■■□□ 2.97
RND1-201ENST00000309739 SUPT5HO00267 1087 aaKnown RBP33.12■■■□□ 2.89
RND1-201ENST00000309739 DCAF8L2P0C7V8 631 aa32.91■■■□□ 2.86
RND1-201ENST00000309739 MYO15BQ96JP2 1530 aa32.76■■■□□ 2.84
RND1-201ENST00000309739 CHIC1Q5VXU3 224 aa32.42■■■□□ 2.78
RND1-201ENST00000309739 ABCC9O60706 1549 aa32.35■■■□□ 2.77
RND1-201ENST00000309739 NACADO15069 1562 aa32.14■■■□□ 2.74
RND1-201ENST00000309739 SCRIBQ14160 1630 aa32.07■■■□□ 2.72
RND1-201ENST00000309739 RSF1Q96T23 1441 aaPredicted RBP31.87■■■□□ 2.69
RND1-201ENST00000309739 RB1CC1Q8TDY2 1594 aa31.71■■■□□ 2.67
RND1-201ENST00000309739 CECR2Q9BXF3 1484 aa31.29■■■□□ 2.6
RND1-201ENST00000309739 MROH2BQ7Z745 1585 aa31.29■■■□□ 2.6
RND1-201ENST00000309739 HRCP23327 699 aa31.28■■■□□ 2.6
RND1-201ENST00000309739 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
RND1-201ENST00000309739 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
RND1-201ENST00000309739 LOC105371045A0A1W2PR82 267 aa31.13■■■□□ 2.57
RND1-201ENST00000309739 WIZO95785 1651 aa31.11■■■□□ 2.57
RND1-201ENST00000309739 PCGF6Q9BYE7 350 aa31.06■■■□□ 2.56
RND1-201ENST00000309739 UNC13AQ9UPW8 1703 aa30.91■■■□□ 2.54
RND1-201ENST00000309739 TOP2AP11388 1531 aaKnown RBP30.89■■■□□ 2.54
RND1-201ENST00000309739 SMARCA4P51532 1647 aa30.89■■■□□ 2.54
RND1-201ENST00000309739 TRIM26Q12899 539 aaPredicted RBP30.88■■■□□ 2.53
RND1-201ENST00000309739 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
RND1-201ENST00000309739 SMARCA2P51531 1590 aa30.61■■■□□ 2.49
RND1-201ENST00000309739 CCDC88BA6NC98 1476 aa30.54■■■□□ 2.48
RND1-201ENST00000309739 PEG3Q9GZU2 1588 aa30.51■■■□□ 2.48
RND1-201ENST00000309739 BICRAQ9NZM4 1560 aa30.51■■■□□ 2.47
RND1-201ENST00000309739 FAM9AQ8IZU1 332 aaPredicted RBP30.48■■■□□ 2.47
RND1-201ENST00000309739 ZEB1P37275 1124 aaPredicted RBP30.43■■■□□ 2.46
RND1-201ENST00000309739 EEA1Q15075 1411 aa30.33■■■□□ 2.45
RND1-201ENST00000309739 ABCC8Q09428 1581 aa30.24■■■□□ 2.43
RND1-201ENST00000309739 PPARGC1BQ86YN6 1023 aaKnown RBP30.15■■■□□ 2.42
RND1-201ENST00000309739 WRNQ14191 1432 aaPredicted RBP eCLIP30.1■■■□□ 2.41
RND1-201ENST00000309739 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
RND1-201ENST00000309739 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
RND1-201ENST00000309739 TNIKQ9UKE5 1360 aa30.04■■■□□ 2.4
RND1-201ENST00000309739 BAZ1BQ9UIG0 1483 aaKnown RBP29.97■■■□□ 2.39
RND1-201ENST00000309739 SOGA1O94964 1423 aa29.93■■■□□ 2.38
RND1-201ENST00000309739 CSRNP3Q8WYN3 585 aa29.92■■■□□ 2.38
RND1-201ENST00000309739 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
RND1-201ENST00000309739 CEP162Q5TB80 1403 aa29.91■■■□□ 2.38
RND1-201ENST00000309739 GOLGA3Q08378 1498 aa29.89■■■□□ 2.38
RND1-201ENST00000309739 KIF21BO75037 1637 aa29.82■■■□□ 2.36
RND1-201ENST00000309739 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
RND1-201ENST00000309739 CEP164Q9UPV0 1460 aa29.77■■■□□ 2.36
RND1-201ENST00000309739 HMGXB3Q12766 1538 aa29.72■■■□□ 2.35
RND1-201ENST00000309739 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
RND1-201ENST00000309739 TOP2BQ02880 1626 aa29.63■■■□□ 2.33
RND1-201ENST00000309739 NCAPD3P42695 1498 aa29.63■■■□□ 2.33
RND1-201ENST00000309739 UBTFP17480 764 aaKnown RBP29.6■■■□□ 2.33
RND1-201ENST00000309739 BIVM-ERCC5R4GMW8 1640 aa29.6■■■□□ 2.33
RND1-201ENST00000309739 CLIP1P30622 1438 aa29.41■■■□□ 2.3
RND1-201ENST00000309739 CCER1Q8TC90 406 aaPredicted RBP29.4■■■□□ 2.3
RND1-201ENST00000309739 ERICH3Q5RHP9 1530 aa29.4■■■□□ 2.3
RND1-201ENST00000309739 VPS8Q8N3P4 1428 aa29.36■■■□□ 2.29
RND1-201ENST00000309739 PRDM2Q13029 1718 aa29.3■■■□□ 2.28
RND1-201ENST00000309739 RAPGEF2Q9Y4G8 1499 aa29.3■■■□□ 2.28
RND1-201ENST00000309739 CFTRP13569 1480 aa29.29■■■□□ 2.28
RND1-201ENST00000309739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.29■■■□□ 2.28
RND1-201ENST00000309739 PRXQ9BXM0 1461 aa29.25■■■□□ 2.27
RND1-201ENST00000309739 CUX1P39880 1505 aa29.19■■■□□ 2.26
RND1-201ENST00000309739 KIF27Q86VH2 1401 aa29.16■■■□□ 2.26
RND1-201ENST00000309739 APLP2Q06481 763 aa29.13■■■□□ 2.25
RND1-201ENST00000309739 TTBK1Q5TCY1 1321 aaPredicted RBP29.01■■■□□ 2.23
RND1-201ENST00000309739 ARAP1Q96P48 1450 aa28.94■■■□□ 2.22
RND1-201ENST00000309739 PELP1Q8IZL8 1130 aaKnown RBP28.93■■■□□ 2.22
RND1-201ENST00000309739 CADPSQ9ULU8 1353 aa28.93■■■□□ 2.22
RND1-201ENST00000309739 CLSPNQ9HAW4 1339 aa28.79■■■□□ 2.2
RND1-201ENST00000309739 DIEXFQ68CQ4 756 aaKnown RBP28.79■■■□□ 2.2
RND1-201ENST00000309739 CC2D2AQ9P2K1 1620 aa28.75■■■□□ 2.19
RND1-201ENST00000309739 CUX2O14529 1486 aa28.74■■■□□ 2.19
RND1-201ENST00000309739 ZNF316A6NFI3 1004 aaPredicted RBP28.74■■■□□ 2.19
RND1-201ENST00000309739 MAP3K1Q13233 1512 aa28.73■■■□□ 2.19
RND1-201ENST00000309739 HNRNPUL2Q1KMD3 747 aaKnown RBP28.73■■■□□ 2.19
RND1-201ENST00000309739 ARHGAP35Q9NRY4 1499 aa28.72■■■□□ 2.19
RND1-201ENST00000309739 RRBP1Q9P2E9 1410 aaKnown RBP28.71■■■□□ 2.19
RND1-201ENST00000309739 IGF1RP08069 1367 aa28.71■■■□□ 2.19
RND1-201ENST00000309739 FGD5Q6ZNL6 1462 aa28.69■■■□□ 2.18
RND1-201ENST00000309739 DNMBPQ6XZF7 1577 aa28.62■■■□□ 2.17
RND1-201ENST00000309739 CARMIL1Q5VZK9 1371 aa28.61■■■□□ 2.17
RND1-201ENST00000309739 RANGAP1P46060 587 aaPredicted RBP28.61■■■□□ 2.17
RND1-201ENST00000309739 FANCD2Q9BXW9 1451 aa28.6■■■□□ 2.17
RND1-201ENST00000309739 SCAF1Q9H7N4 1312 aaKnown RBP28.58■■■□□ 2.17
RND1-201ENST00000309739 CENPBP07199 599 aaPredicted RBP28.57■■■□□ 2.16
RND1-201ENST00000309739 ABCA10Q8WWZ4 1543 aa28.52■■■□□ 2.16
RND1-201ENST00000309739 ACIN1Q9UKV3 1341 aaKnown RBP28.52■■■□□ 2.16
RND1-201ENST00000309739 KANK4Q5T7N3 995 aaPredicted RBP28.51■■■□□ 2.15
RND1-201ENST00000309739 TIAM1Q13009 1591 aa28.51■■■□□ 2.15
RND1-201ENST00000309739 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
RND1-201ENST00000309739 CCNB3Q8WWL7 1395 aa28.49■■■□□ 2.15
RND1-201ENST00000309739 CUL7Q14999 1698 aa28.48■■■□□ 2.15
RND1-201ENST00000309739 DHX57Q6P158 1386 aaKnown RBP28.46■■■□□ 2.15
RND1-201ENST00000309739 EFCAB5A4FU69 1503 aa28.44■■■□□ 2.14
RND1-201ENST00000309739 TOPBP1Q92547 1522 aa28.44■■■□□ 2.14
RND1-201ENST00000309739 LAMC3Q9Y6N6 1575 aa28.44■■■□□ 2.14
RND1-201ENST00000309739 CFAP43Q8NDM7 1665 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms