Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
BEST4Q8NFU0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST4Q8NFU0 MIR3181-201ENST00000578512 73 ntBASIC17.76■□□□□ 0.43
BEST4Q8NFU0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST4Q8NFU0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST4Q8NFU0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST4Q8NFU0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.76■□□□□ 0.43
BEST4Q8NFU0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST4Q8NFU0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.76■□□□□ 0.43
BEST4Q8NFU0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 AC116562.4-201ENST00000641316 2276 ntBASIC17.75■□□□□ 0.43
BEST4Q8NFU0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 AP004607.7-201ENST00000527152 1677 ntBASIC17.75■□□□□ 0.43
BEST4Q8NFU0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST4Q8NFU0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 UNC93B8-201ENST00000511903 705 ntBASIC17.74■□□□□ 0.43
BEST4Q8NFU0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST4Q8NFU0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST4Q8NFU0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST4Q8NFU0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST4Q8NFU0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST4Q8NFU0 AC020907.5-201ENST00000624372 1936 ntBASIC17.72■□□□□ 0.43
BEST4Q8NFU0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST4Q8NFU0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST4Q8NFU0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST4Q8NFU0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST4Q8NFU0 AC009299.2-201ENST00000482477 511 ntBASIC17.72■□□□□ 0.43
BEST4Q8NFU0 AC026471.1-201ENST00000564629 3026 ntBASIC17.72■□□□□ 0.43
BEST4Q8NFU0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST4Q8NFU0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST4Q8NFU0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.71■□□□□ 0.43
BEST4Q8NFU0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms