RNA–Protein interactions for RNA: ENST00000641316.1

AC116562.4-201, humanhuman

BASIC

Gene AC116562.4, Length 2,276 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116562.4-201ENST00000641316 NISCHQ9Y2I1 1504 aa41.27■■■■■ 4.2
AC116562.4-201ENST00000641316 CCDC180Q9P1Z9 1646 aa35.25■■■■□ 3.23
AC116562.4-201ENST00000641316 SHROOM4Q9ULL8 1493 aa34.91■■■■□ 3.18
AC116562.4-201ENST00000641316 ZCCHC6Q5VYS8 1495 aaKnown RBP34.88■■■■□ 3.17
AC116562.4-201ENST00000641316 SUPT5HO00267 1087 aaKnown RBP34.15■■■■□ 3.06
AC116562.4-201ENST00000641316 DCAF8L2P0C7V8 631 aa34.13■■■■□ 3.05
AC116562.4-201ENST00000641316 DCAF1Q9Y4B6 1507 aa33.91■■■■□ 3.02
AC116562.4-201ENST00000641316 CHIC1Q5VXU3 224 aa33.15■■■□□ 2.9
AC116562.4-201ENST00000641316 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
AC116562.4-201ENST00000641316 SCRIBQ14160 1630 aa32.92■■■□□ 2.86
AC116562.4-201ENST00000641316 ABCC9O60706 1549 aa32.88■■■□□ 2.85
AC116562.4-201ENST00000641316 NACADO15069 1562 aa32.61■■■□□ 2.81
AC116562.4-201ENST00000641316 RSF1Q96T23 1441 aaPredicted RBP32.55■■■□□ 2.8
AC116562.4-201ENST00000641316 RB1CC1Q8TDY2 1594 aa32.2■■■□□ 2.75
AC116562.4-201ENST00000641316 CECR2Q9BXF3 1484 aa32.15■■■□□ 2.74
AC116562.4-201ENST00000641316 LOC105371045A0A1W2PR82 267 aa32.11■■■□□ 2.73
AC116562.4-201ENST00000641316 MROH2BQ7Z745 1585 aa32.05■■■□□ 2.72
AC116562.4-201ENST00000641316 PCGF6Q9BYE7 350 aa31.88■■■□□ 2.69
AC116562.4-201ENST00000641316 WIZO95785 1651 aa31.88■■■□□ 2.69
AC116562.4-201ENST00000641316 TRIM41Q8WV44 630 aa31.87■■■□□ 2.69
AC116562.4-201ENST00000641316 HRCP23327 699 aa31.79■■■□□ 2.68
AC116562.4-201ENST00000641316 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
AC116562.4-201ENST00000641316 UNC13AQ9UPW8 1703 aa31.62■■■□□ 2.65
AC116562.4-201ENST00000641316 FAM9AQ8IZU1 332 aaPredicted RBP31.54■■■□□ 2.64
AC116562.4-201ENST00000641316 SMARCA4P51532 1647 aa31.48■■■□□ 2.63
AC116562.4-201ENST00000641316 TOP2AP11388 1531 aaKnown RBP31.41■■■□□ 2.62
AC116562.4-201ENST00000641316 EIF4G1Q04637 1599 aaKnown RBP31.4■■■□□ 2.62
AC116562.4-201ENST00000641316 TRIM26Q12899 539 aaPredicted RBP31.38■■■□□ 2.61
AC116562.4-201ENST00000641316 CCDC88BA6NC98 1476 aa31.23■■■□□ 2.59
AC116562.4-201ENST00000641316 EHMT2Q96KQ7 1210 aa31.23■■■□□ 2.59
AC116562.4-201ENST00000641316 BICRAQ9NZM4 1560 aa31.22■■■□□ 2.59
AC116562.4-201ENST00000641316 SMARCA2P51531 1590 aa31.22■■■□□ 2.59
AC116562.4-201ENST00000641316 PABPN1Q86U42 306 aaKnown RBP eCLIP31.18■■■□□ 2.58
AC116562.4-201ENST00000641316 PPARGC1BQ86YN6 1023 aaKnown RBP31.1■■■□□ 2.57
AC116562.4-201ENST00000641316 ABCC8Q09428 1581 aa31.06■■■□□ 2.56
AC116562.4-201ENST00000641316 PEG3Q9GZU2 1588 aa30.91■■■□□ 2.54
AC116562.4-201ENST00000641316 SOGA1O94964 1423 aa30.72■■■□□ 2.51
AC116562.4-201ENST00000641316 ATAD2BQ9ULI0 1458 aa30.69■■■□□ 2.5
AC116562.4-201ENST00000641316 ZEB1P37275 1124 aaPredicted RBP30.63■■■□□ 2.49
AC116562.4-201ENST00000641316 EEA1Q15075 1411 aa30.61■■■□□ 2.49
AC116562.4-201ENST00000641316 BAZ1BQ9UIG0 1483 aaKnown RBP30.61■■■□□ 2.49
AC116562.4-201ENST00000641316 WRNQ14191 1432 aaPredicted RBP eCLIP30.59■■■□□ 2.49
AC116562.4-201ENST00000641316 RUSC2Q8N2Y8 1516 aa30.58■■■□□ 2.49
AC116562.4-201ENST00000641316 CSRNP3Q8WYN3 585 aa30.54■■■□□ 2.48
AC116562.4-201ENST00000641316 CEP162Q5TB80 1403 aa30.51■■■□□ 2.48
AC116562.4-201ENST00000641316 TNIKQ9UKE5 1360 aa30.5■■■□□ 2.47
AC116562.4-201ENST00000641316 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
AC116562.4-201ENST00000641316 UBTFP17480 764 aaKnown RBP30.38■■■□□ 2.45
AC116562.4-201ENST00000641316 GOLGA3Q08378 1498 aa30.37■■■□□ 2.45
AC116562.4-201ENST00000641316 CEP164Q9UPV0 1460 aa30.22■■■□□ 2.43
AC116562.4-201ENST00000641316 KIF21BO75037 1637 aa30.21■■■□□ 2.43
AC116562.4-201ENST00000641316 TTBK1Q5TCY1 1321 aaPredicted RBP30.19■■■□□ 2.42
AC116562.4-201ENST00000641316 HMGXB3Q12766 1538 aa30.16■■■□□ 2.42
AC116562.4-201ENST00000641316 NCAPD3P42695 1498 aa30.15■■■□□ 2.42
AC116562.4-201ENST00000641316 TOP2BQ02880 1626 aa30.13■■■□□ 2.41
AC116562.4-201ENST00000641316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.12■■■□□ 2.41
AC116562.4-201ENST00000641316 CCER1Q8TC90 406 aaPredicted RBP30.06■■■□□ 2.4
AC116562.4-201ENST00000641316 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
AC116562.4-201ENST00000641316 RAPGEF2Q9Y4G8 1499 aa30■■■□□ 2.39
AC116562.4-201ENST00000641316 CLIP1P30622 1438 aa30■■■□□ 2.39
AC116562.4-201ENST00000641316 CUX1P39880 1505 aa29.86■■■□□ 2.37
AC116562.4-201ENST00000641316 VPS8Q8N3P4 1428 aa29.86■■■□□ 2.37
AC116562.4-201ENST00000641316 CFTRP13569 1480 aa29.85■■■□□ 2.37
AC116562.4-201ENST00000641316 ERICH3Q5RHP9 1530 aa29.76■■■□□ 2.36
AC116562.4-201ENST00000641316 PRXQ9BXM0 1461 aa29.76■■■□□ 2.35
AC116562.4-201ENST00000641316 RANGAP1P46060 587 aaPredicted RBP29.76■■■□□ 2.35
AC116562.4-201ENST00000641316 KIF27Q86VH2 1401 aa29.68■■■□□ 2.34
AC116562.4-201ENST00000641316 APLP2Q06481 763 aa29.68■■■□□ 2.34
AC116562.4-201ENST00000641316 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
AC116562.4-201ENST00000641316 HNRNPUL2Q1KMD3 747 aaKnown RBP29.56■■■□□ 2.32
AC116562.4-201ENST00000641316 ARAP1Q96P48 1450 aa29.55■■■□□ 2.32
AC116562.4-201ENST00000641316 CADPSQ9ULU8 1353 aa29.54■■■□□ 2.32
AC116562.4-201ENST00000641316 CC2D2AQ9P2K1 1620 aa29.48■■■□□ 2.31
AC116562.4-201ENST00000641316 CUX2O14529 1486 aa29.42■■■□□ 2.3
AC116562.4-201ENST00000641316 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
AC116562.4-201ENST00000641316 IGF1RP08069 1367 aa29.35■■■□□ 2.29
AC116562.4-201ENST00000641316 DIEXFQ68CQ4 756 aaKnown RBP29.34■■■□□ 2.29
AC116562.4-201ENST00000641316 ARHGAP35Q9NRY4 1499 aa29.33■■■□□ 2.29
AC116562.4-201ENST00000641316 KANK4Q5T7N3 995 aaPredicted RBP29.31■■■□□ 2.28
AC116562.4-201ENST00000641316 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.27
AC116562.4-201ENST00000641316 CARMIL1Q5VZK9 1371 aa29.22■■■□□ 2.27
AC116562.4-201ENST00000641316 ZNF316A6NFI3 1004 aaPredicted RBP29.21■■■□□ 2.27
AC116562.4-201ENST00000641316 RRBP1Q9P2E9 1410 aaKnown RBP29.13■■■□□ 2.25
AC116562.4-201ENST00000641316 DNMBPQ6XZF7 1577 aa29.12■■■□□ 2.25
AC116562.4-201ENST00000641316 SCAF1Q9H7N4 1312 aaKnown RBP29.12■■■□□ 2.25
AC116562.4-201ENST00000641316 NESP48681 1621 aa29.08■■■□□ 2.25
AC116562.4-201ENST00000641316 TOPBP1Q92547 1522 aa29.06■■■□□ 2.24
AC116562.4-201ENST00000641316 RAD54L2Q9Y4B4 1467 aa29.05■■■□□ 2.24
AC116562.4-201ENST00000641316 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
AC116562.4-201ENST00000641316 ABCA10Q8WWZ4 1543 aa29.02■■■□□ 2.24
AC116562.4-201ENST00000641316 DHX57Q6P158 1386 aaKnown RBP29.01■■■□□ 2.24
AC116562.4-201ENST00000641316 CCNB3Q8WWL7 1395 aa29.01■■■□□ 2.23
AC116562.4-201ENST00000641316 TIAM1Q13009 1591 aa29■■■□□ 2.23
AC116562.4-201ENST00000641316 CLSPNQ9HAW4 1339 aa28.98■■■□□ 2.23
AC116562.4-201ENST00000641316 MAP3K1Q13233 1512 aa28.98■■■□□ 2.23
AC116562.4-201ENST00000641316 ACIN1Q9UKV3 1341 aaKnown RBP28.96■■■□□ 2.23
AC116562.4-201ENST00000641316 NEUROD1Q13562 356 aa28.92■■■□□ 2.22
AC116562.4-201ENST00000641316 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
AC116562.4-201ENST00000641316 FHAD1B1AJZ9 1412 aa28.89■■■□□ 2.22
AC116562.4-201ENST00000641316 CUL7Q14999 1698 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms