Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 ELM1YKL048C 1923 nt3.82□□□□□ -1.8
TY1A-PR3Q6Q5H1 KGD1YIL125W 3045 nt3.81□□□□□ -1.8
TY1A-PR3Q6Q5H1 YER023C-AYER023C-A 213 nt3.81□□□□□ -1.8
TY1A-PR3Q6Q5H1 ATG33YLR356W 594 nt3.81□□□□□ -1.8
TY1A-PR3Q6Q5H1 MUS81YDR386W 1899 nt3.81□□□□□ -1.8
TY1A-PR3Q6Q5H1 NUP133YKR082W 3474 nt3.8□□□□□ -1.8
TY1A-PR3Q6Q5H1 ULS1YOR191W 4860 nt3.8□□□□□ -1.8
TY1A-PR3Q6Q5H1 CDC36YDL165W 576 nt3.8□□□□□ -1.8
TY1A-PR3Q6Q5H1 SMA2YML066C 1110 nt3.8□□□□□ -1.8
TY1A-PR3Q6Q5H1 HEM4YOR278W 828 nt3.8□□□□□ -1.8
TY1A-PR3Q6Q5H1 YBR085C-AYBR085C-A 258 nt3.8□□□□□ -1.8
TY1A-PR3Q6Q5H1 GRS2YPR081C 1857 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 FAA2YER015W 2235 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 KHA1YJL094C 2622 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 YDL176WYDL176W 2127 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 ATG2YNL242W 4779 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 HOS3YPL116W 2094 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 URB2YJR041C 3525 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 STE14YDR410C 720 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 AIM26YKL037W 357 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 PAU23YLR037C 375 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 YPL025CYPL025C 558 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 NUP60YAR002W 1620 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 VHR2YER064C 1518 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 AIP1YMR092C 1848 nt3.79□□□□□ -1.8
TY1A-PR3Q6Q5H1 ROD1YOR018W 2514 nt3.78□□□□□ -1.8
TY1A-PR3Q6Q5H1 PCF11YDR228C 1881 nt3.78□□□□□ -1.8
TY1A-PR3Q6Q5H1 SRL3YKR091W 741 nt3.78□□□□□ -1.8
TY1A-PR3Q6Q5H1 YLR416CYLR416C 399 nt3.78□□□□□ -1.8
TY1A-PR3Q6Q5H1 DAL82YNL314W 768 nt3.78□□□□□ -1.8
TY1A-PR3Q6Q5H1 ISU1YPL135W 498 nt3.78□□□□□ -1.8
TY1A-PR3Q6Q5H1 TRK1YJL129C 3708 nt3.78□□□□□ -1.8
TY1A-PR3Q6Q5H1 21S_rRNA21S_rRNA 3296 nt3.77□□□□□ -1.81
TY1A-PR3Q6Q5H1 snR7-SsnR7-S 179 nt3.77□□□□□ -1.81
TY1A-PR3Q6Q5H1 TSA2YDR453C 591 nt3.77□□□□□ -1.81
TY1A-PR3Q6Q5H1 AST2YER101C 1293 nt3.77□□□□□ -1.81
TY1A-PR3Q6Q5H1 YMR307C-AYMR307C-A 195 nt3.77□□□□□ -1.81
TY1A-PR3Q6Q5H1 RPL23AYBL087C 414 nt3.77□□□□□ -1.81
TY1A-PR3Q6Q5H1 EGD1YPL037C 474 nt3.77□□□□□ -1.81
TY1A-PR3Q6Q5H1 ARK1YNL020C 1917 nt3.77□□□□□ -1.81
TY1A-PR3Q6Q5H1 CPA2YJR109C 3357 nt3.77□□□□□ -1.81
TY1A-PR3Q6Q5H1 BYE1YKL005C 1785 nt3.76□□□□□ -1.81
TY1A-PR3Q6Q5H1 RPB9YGL070C 369 nt3.76□□□□□ -1.81
TY1A-PR3Q6Q5H1 ADK1YDR226W 669 nt3.75□□□□□ -1.81
TY1A-PR3Q6Q5H1 YDR344CYDR344C 444 nt3.75□□□□□ -1.81
TY1A-PR3Q6Q5H1 PSY1YKL076C 384 nt3.75□□□□□ -1.81
TY1A-PR3Q6Q5H1 SPP382YLR424W 2127 nt3.75□□□□□ -1.81
TY1A-PR3Q6Q5H1 YOL160WYOL160W 342 nt3.75□□□□□ -1.81
TY1A-PR3Q6Q5H1 YPR059CYPR059C 387 nt3.75□□□□□ -1.81
TY1A-PR3Q6Q5H1 YGR237CYGR237C 2358 nt3.75□□□□□ -1.81
TY1A-PR3Q6Q5H1 NMA111YNL123W 2994 nt3.75□□□□□ -1.81
TY1A-PR3Q6Q5H1 RKM1YPL208W 1752 nt3.74□□□□□ -1.81
TY1A-PR3Q6Q5H1 MRP8YKL142W 660 nt3.74□□□□□ -1.81
TY1A-PR3Q6Q5H1 YAL056C-AYAL056C-A 351 nt3.74□□□□□ -1.81
TY1A-PR3Q6Q5H1 RPL8BYLL045C 771 nt3.74□□□□□ -1.81
TY1A-PR3Q6Q5H1 YAR019W-AYAR019W-A 333 nt3.74□□□□□ -1.81
TY1A-PR3Q6Q5H1 YAR070CYAR070C 300 nt3.74□□□□□ -1.81
TY1A-PR3Q6Q5H1 MIS1YBR084W 2928 nt3.74□□□□□ -1.81
TY1A-PR3Q6Q5H1 HFM1YGL251C 3564 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 SNF12YNR023W 1701 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 YCK3YER123W 1575 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 PDC2YDR081C 2778 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 YDL211CYDL211C 1119 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 FRQ1YDR373W 573 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 ISD11YER048W-A 285 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 YGR069WYGR069W 336 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 tT(UGU)Q1tT(UGU)Q1 76 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 TMA10YLR327C 261 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 FSH3YOR280C 801 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 SSY1YDR160W 2559 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 TAF7YMR227C 1773 nt3.73□□□□□ -1.81
TY1A-PR3Q6Q5H1 VPS41YDR080W 2979 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 TLC1TLC1 1301 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 LCB5YLR260W 2064 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 SPT23YKL020C 3249 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 ARO2YGL148W 1131 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 POG1YIL122W 1056 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 RPS22BYLR367W 393 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 YLR458WYLR458W 381 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 YNR075C-AYNR075C-A 93 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 YPR053CYPR053C 456 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 COX1Q0045 1605 nt3.72□□□□□ -1.81
TY1A-PR3Q6Q5H1 MSD1YPL104W 1977 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 KIP3YGL216W 2418 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 MNN4YKL201C 3537 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 SNA2YDR525W-A 240 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 YGR022CYGR022C 330 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 TAR1YLR154W-C 375 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 YBL008W-AYBL008W-A 240 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 RFC3YNL290W 1023 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 PTA1YAL043C 2358 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 TCO89YPL180W 2400 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 HMG1YML075C 3165 nt3.71□□□□□ -1.82
TY1A-PR3Q6Q5H1 APL4YPR029C 2499 nt3.7□□□□□ -1.82
TY1A-PR3Q6Q5H1 NAN1YPL126W 2691 nt3.7□□□□□ -1.82
TY1A-PR3Q6Q5H1 REV1YOR346W 2958 nt3.7□□□□□ -1.82
TY1A-PR3Q6Q5H1 PRK1YIL095W 2433 nt3.7□□□□□ -1.82
TY1A-PR3Q6Q5H1 TRZ1YKR079C 2517 nt3.7□□□□□ -1.82
TY1A-PR3Q6Q5H1 RPS13YDR064W 456 nt3.7□□□□□ -1.82
TY1A-PR3Q6Q5H1 YJL182CYJL182C 318 nt3.7□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms