Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	YMR294W-A	YMR294W-A	360 nt		3.36	□□□□□ -1.87
CAF16	P43569	RFC3	YNL290W	1023 nt		3.36	□□□□□ -1.87
CAF16	P43569	ERP4	YOR016C	624 nt		3.36	□□□□□ -1.87
CAF16	P43569	YPL185W	YPL185W	396 nt		3.36	□□□□□ -1.87
CAF16	P43569	MDM32	YOR147W	1869 nt		3.36	□□□□□ -1.87
CAF16	P43569	GPI13	YLL031C	3054 nt		3.36	□□□□□ -1.87
CAF16	P43569	SIP3	YNL257C	3690 nt		3.36	□□□□□ -1.87
CAF16	P43569	KIN4	YOR233W	2403 nt		3.35	□□□□□ -1.87
CAF16	P43569	DIA2	YOR080W	2199 nt		3.35	□□□□□ -1.87
CAF16	P43569	TSA2	YDR453C	591 nt		3.35	□□□□□ -1.87
CAF16	P43569	YEL018C-A	YEL018C-A	534 nt		3.35	□□□□□ -1.87
CAF16	P43569	YHR214C-E	YHR214C-E	300 nt		3.35	□□□□□ -1.87
CAF16	P43569	YAR070C	YAR070C	300 nt		3.35	□□□□□ -1.87
CAF16	P43569	RIM11	YMR139W	1113 nt		3.35	□□□□□ -1.87
CAF16	P43569	YNL146W	YNL146W	303 nt		3.35	□□□□□ -1.87
CAF16	P43569	YOR385W	YOR385W	873 nt		3.35	□□□□□ -1.87
CAF16	P43569	SLM6	YBR266C	453 nt		3.35	□□□□□ -1.87
CAF16	P43569	CCT7	YJL111W	1653 nt		3.35	□□□□□ -1.87
CAF16	P43569	MTR4	YJL050W	3222 nt		3.35	□□□□□ -1.87
CAF16	P43569	EPL1	YFL024C	2499 nt		3.35	□□□□□ -1.87
CAF16	P43569	YGR027W-B	YGR027W-B	5268 nt		3.35	□□□□□ -1.87
CAF16	P43569	YLR227W-B	YLR227W-B	5268 nt		3.35	□□□□□ -1.87
CAF16	P43569	YPR158C-D	YPR158C-D	5268 nt		3.35	□□□□□ -1.87
CAF16	P43569	PDC2	YDR081C	2778 nt		3.34	□□□□□ -1.87
CAF16	P43569	NIC96	YFR002W	2520 nt		3.34	□□□□□ -1.87
CAF16	P43569	YKL100C	YKL100C	1764 nt		3.34	□□□□□ -1.87
CAF16	P43569	HSP30	YCR021C	999 nt		3.34	□□□□□ -1.87
CAF16	P43569	MRH1	YDR033W	963 nt		3.34	□□□□□ -1.87
CAF16	P43569	YER107W-A	YER107W-A	321 nt		3.34	□□□□□ -1.87
CAF16	P43569	YGR025W	YGR025W	303 nt		3.34	□□□□□ -1.87
CAF16	P43569	PXR1	YGR280C	816 nt		3.34	□□□□□ -1.87
CAF16	P43569	YLR364C-A	YLR364C-A	123 nt		3.34	□□□□□ -1.87
CAF16	P43569	NSL1	YPL233W	651 nt		3.34	□□□□□ -1.87
CAF16	P43569	YNR065C	YNR065C	3351 nt		3.34	□□□□□ -1.87
CAF16	P43569	TAF1	YGR274C	3201 nt		3.34	□□□□□ -1.88
CAF16	P43569	NPR1	YNL183C	2373 nt		3.33	□□□□□ -1.88
CAF16	P43569	RPS24B	YIL069C	408 nt		3.33	□□□□□ -1.88
CAF16	P43569	YKL111C	YKL111C	336 nt		3.33	□□□□□ -1.88
CAF16	P43569	YNL043C	YNL043C	321 nt		3.33	□□□□□ -1.88
CAF16	P43569	SWM2	YNR004W	441 nt		3.33	□□□□□ -1.88
CAF16	P43569	YOR192C-C	YOR192C-C	237 nt		3.33	□□□□□ -1.88
CAF16	P43569	snR13	snR13	124 nt		3.33	□□□□□ -1.88
CAF16	P43569	RPL20B	YOR312C	519 nt		3.33	□□□□□ -1.88
CAF16	P43569	NSP1	YJL041W	2472 nt		3.33	□□□□□ -1.88
CAF16	P43569	CDH1	YGL003C	1701 nt		3.33	□□□□□ -1.88
CAF16	P43569	NDT80	YHR124W	1884 nt		3.33	□□□□□ -1.88
CAF16	P43569	SPC105	YGL093W	2754 nt		3.32	□□□□□ -1.88
CAF16	P43569	YPR022C	YPR022C	3402 nt		3.32	□□□□□ -1.88
CAF16	P43569	ATP17	YDR377W	306 nt		3.32	□□□□□ -1.88
CAF16	P43569	YFL065C	YFL065C	309 nt		3.32	□□□□□ -1.88
CAF16	P43569	RPS21B	YJL136C	264 nt		3.32	□□□□□ -1.88
CAF16	P43569	ANB1	YJR047C	474 nt		3.32	□□□□□ -1.88
CAF16	P43569	URA10	YMR271C	684 nt		3.32	□□□□□ -1.88
CAF16	P43569	YPL276W	YPL276W	438 nt		3.32	□□□□□ -1.88
CAF16	P43569	YSY6	YBR162W-A	198 nt		3.32	□□□□□ -1.88
CAF16	P43569	KAP95	YLR347C	2586 nt		3.32	□□□□□ -1.88
CAF16	P43569	BOI1	YBL085W	2943 nt		3.32	□□□□□ -1.88
CAF16	P43569	PEX1	YKL197C	3132 nt		3.32	□□□□□ -1.88
CAF16	P43569	SSM4	YIL030C	3960 nt		3.31	□□□□□ -1.88
CAF16	P43569	EXO84	YBR102C	2262 nt		3.31	□□□□□ -1.88
CAF16	P43569	YDL242W	YDL242W	354 nt		3.31	□□□□□ -1.88
CAF16	P43569	NOP19	YGR251W	591 nt		3.31	□□□□□ -1.88
CAF16	P43569	YHL006W-A	YHL006W-A	354 nt		3.31	□□□□□ -1.88
CAF16	P43569	YJR140W-A	YJR140W-A	150 nt		3.31	□□□□□ -1.88
CAF16	P43569	RNP1	YLL046C	750 nt		3.31	□□□□□ -1.88
CAF16	P43569	PEP12	YOR036W	867 nt		3.31	□□□□□ -1.88
CAF16	P43569	YPR039W	YPR039W	336 nt		3.31	□□□□□ -1.88
CAF16	P43569	LOS1	YKL205W	3303 nt		3.31	□□□□□ -1.88
CAF16	P43569	ARO1	YDR127W	4767 nt		3.3	□□□□□ -1.88
CAF16	P43569	MRPL11	YDL202W	750 nt		3.3	□□□□□ -1.88
CAF16	P43569	STE14	YDR410C	720 nt		3.3	□□□□□ -1.88
CAF16	P43569	RPC10	YHR143W-A	213 nt		3.3	□□□□□ -1.88
CAF16	P43569	YPL278C	YPL278C	303 nt		3.3	□□□□□ -1.88
CAF16	P43569	STU1	YBL034C	4542 nt		3.3	□□□□□ -1.88
CAF16	P43569	FAT1	YBR041W	2010 nt		3.3	□□□□□ -1.88
CAF16	P43569	COG3	YER157W	2406 nt		3.3	□□□□□ -1.88
CAF16	P43569	MSK1	YNL073W	1731 nt		3.3	□□□□□ -1.88
CAF16	P43569	RIX1	YHR197W	2292 nt		3.3	□□□□□ -1.88
CAF16	P43569	GNT1	YOR320C	1476 nt		3.29	□□□□□ -1.88
CAF16	P43569	MSL5	YLR116W	1431 nt		3.29	□□□□□ -1.88
CAF16	P43569	SEN54	YPL083C	1404 nt		3.29	□□□□□ -1.88
CAF16	P43569	SEA4	YBL104C	3117 nt		3.29	□□□□□ -1.88
CAF16	P43569	YDL240C-A	YDL240C-A	138 nt		3.29	□□□□□ -1.88
CAF16	P43569	VFA1	YER128W	612 nt		3.29	□□□□□ -1.88
CAF16	P43569	RTT102	YGR275W	474 nt		3.29	□□□□□ -1.88
CAF16	P43569	YHR139C-A	YHR139C-A	312 nt		3.29	□□□□□ -1.88
CAF16	P43569	tV(CAC)D	tV(CAC)D	73 nt		3.29	□□□□□ -1.88
CAF16	P43569	tV(CAC)H	tV(CAC)H	73 nt		3.29	□□□□□ -1.88
CAF16	P43569	PEP8	YJL053W	1140 nt		3.29	□□□□□ -1.88
CAF16	P43569	UBC7	YMR022W	498 nt		3.29	□□□□□ -1.88
CAF16	P43569	RPS7B	YNL096C	573 nt		3.29	□□□□□ -1.88
CAF16	P43569	MRPL50	YNR022C	420 nt		3.29	□□□□□ -1.88
CAF16	P43569	MET5	YJR137C	4329 nt		3.29	□□□□□ -1.88
CAF16	P43569	NOG1	YPL093W	1944 nt		3.29	□□□□□ -1.88
CAF16	P43569	STE23	YLR389C	3084 nt		3.28	□□□□□ -1.88
CAF16	P43569	FAR1	YJL157C	2493 nt		3.28	□□□□□ -1.88
CAF16	P43569	YER137W-A	YER137W-A	306 nt		3.28	□□□□□ -1.88
CAF16	P43569	YER188C-A	YER188C-A	300 nt		3.28	□□□□□ -1.88
CAF16	P43569	YMR31	YFR049W	372 nt		3.28	□□□□□ -1.88
CAF16	P43569	YIR040C	YIR040C	333 nt		3.28	□□□□□ -1.88

Retrieved 100 of 7,029 protein–RNA pairs in 77.7 ms