RNA–Protein interactions for RNA: YLL046C

RNP1, Transcript of Ribonucleoprotein that contains two RNA recognition motifs (RRM), yeastyeast

Gene RNP1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNP1YLL046C MTC1P47018 478 aaKnown RBP16.62■□□□□ 0.25
RNP1YLL046C FAP1P53971 965 aa16.59■□□□□ 0.25
RNP1YLL046C PRY3P47033 881 aa15.61■□□□□ 0.09
RNP1YLL046C AAD16Q02895 342 aa14.87□□□□□ -0.03
RNP1YLL046C PRI1P10363 409 aa14.76□□□□□ -0.05
RNP1YLL046C HAA1Q12753 694 aaKnown RBP14.55□□□□□ -0.08
RNP1YLL046C YCK3P39962 524 aa14.49□□□□□ -0.09
RNP1YLL046C DRS1P32892 752 aaKnown RBP14.23□□□□□ -0.13
RNP1YLL046C ISW2Q08773 1120 aa14.15□□□□□ -0.14
RNP1YLL046C RPG1P38249 964 aaKnown RBP13.99□□□□□ -0.17
RNP1YLL046C TSR3Q12094 313 aaKnown RBP13.89□□□□□ -0.19
RNP1YLL046C MRPL32P25348 183 aa13.41□□□□□ -0.26
RNP1YLL046C YGL015CP33199 130 aa13.22□□□□□ -0.29
RNP1YLL046C DIP2Q12220 943 aaPredicted RBP12.95□□□□□ -0.34
RNP1YLL046C RSE1Q04693 1361 aaKnown RBP12.91□□□□□ -0.34
RNP1YLL046C REB1P21538 810 aa12.7□□□□□ -0.38
RNP1YLL046C BUD31P25337 157 aaPredicted RBP12.68□□□□□ -0.38
RNP1YLL046C RPL17AP05740 184 aaKnown RBP12.57□□□□□ -0.4
RNP1YLL046C RPL17BP46990 184 aaKnown RBP12.57□□□□□ -0.4
RNP1YLL046C CDC27P38042 758 aa12.4□□□□□ -0.42
RNP1YLL046C UBP10P53874 792 aaPredicted RBP12.28□□□□□ -0.44
RNP1YLL046C MAP2P38174 421 aaKnown RBP12.21□□□□□ -0.45
RNP1YLL046C AVT3P36062 692 aa12.04□□□□□ -0.48
RNP1YLL046C YKR023WP36119 530 aaKnown RBP12.04□□□□□ -0.48
RNP1YLL046C SIS1P25294 352 aaKnown RBP12.01□□□□□ -0.49
RNP1YLL046C UBP9P39967 754 aa11.89□□□□□ -0.51
RNP1YLL046C TIF4632P39936 914 aaKnown RBP11.87□□□□□ -0.51
RNP1YLL046C SPT21P35209 758 aa11.85□□□□□ -0.51
RNP1YLL046C HOP09932 586 aa11.84□□□□□ -0.51
RNP1YLL046C DCD1P06773 312 aa11.82□□□□□ -0.52
RNP1YLL046C TFC8Q12308 588 aa11.82□□□□□ -0.52
RNP1YLL046C TGL3P40308 642 aa11.76□□□□□ -0.53
RNP1YLL046C SCY1P53009 804 aa11.76□□□□□ -0.53
RNP1YLL046C SLX5P32828 619 aaKnown RBP11.7□□□□□ -0.54
RNP1YLL046C BCH2P36122 765 aa11.38□□□□□ -0.59
RNP1YLL046C BFR2Q06631 534 aaKnown RBP11.21□□□□□ -0.61
RNP1YLL046C YBL029C-AQ3E756 94 aa11.16□□□□□ -0.62
RNP1YLL046C RIM101P33400 625 aa11.15□□□□□ -0.62
RNP1YLL046C MST1P07236 462 aa11.06□□□□□ -0.64
RNP1YLL046C YOR238WQ08634 303 aa11.03□□□□□ -0.64
RNP1YLL046C EPS1P40557 701 aa11.02□□□□□ -0.65
RNP1YLL046C BDF1P35817 686 aa11□□□□□ -0.65
RNP1YLL046C VNX1P42839 908 aa10.95□□□□□ -0.66
RNP1YLL046C SPP1Q03012 353 aa10.92□□□□□ -0.66
RNP1YLL046C YJL171CP46992 396 aa10.85□□□□□ -0.67
RNP1YLL046C NSR1P27476 414 aaKnown RBP RIP-Chip data10.83□□□□□ -0.68not detected
RNP1YLL046C WSC3Q12215 556 aa10.81□□□□□ -0.68
RNP1YLL046C YAP5P40574 245 aa10.78□□□□□ -0.68
RNP1YLL046C PTP3P40048 928 aa10.76□□□□□ -0.69
RNP1YLL046C AIR2Q12476 344 aaKnown RBP10.75□□□□□ -0.69
RNP1YLL046C OXP1P28273 1286 aa10.71□□□□□ -0.69
RNP1YLL046C YIL055CP40523 627 aaKnown RBP10.71□□□□□ -0.69
RNP1YLL046C FKH1P40466 484 aa10.69□□□□□ -0.7
RNP1YLL046C TIF11P38912 153 aaKnown RBP10.68□□□□□ -0.7
RNP1YLL046C BBC1P47068 1157 aa10.67□□□□□ -0.7
RNP1YLL046C GTT3P39996 337 aa10.63□□□□□ -0.71
RNP1YLL046C BMT6Q12291 365 aa10.55□□□□□ -0.72
RNP1YLL046C LDB19Q12502 818 aa10.54□□□□□ -0.72
RNP1YLL046C AI2P03876 854 aa10.5□□□□□ -0.73
RNP1YLL046C ULI1P43604 169 aa10.48□□□□□ -0.73
RNP1YLL046C RSM7P47150 247 aa10.48□□□□□ -0.73
RNP1YLL046C IOC2Q12072 812 aa10.4□□□□□ -0.74
RNP1YLL046C PIB1Q06651 286 aa10.32□□□□□ -0.76
RNP1YLL046C YAH1Q12184 172 aaKnown RBP10.32□□□□□ -0.76
RNP1YLL046C EAP1P36041 632 aaKnown RBP10.28□□□□□ -0.76
RNP1YLL046C MSB4Q12317 492 aa10.27□□□□□ -0.77
RNP1YLL046C RTG1P32607 177 aa10.23□□□□□ -0.77
RNP1YLL046C NCR1Q12200 1170 aa10.19□□□□□ -0.78
RNP1YLL046C TRP5P00931 707 aaKnown RBP10.13□□□□□ -0.79
RNP1YLL046C SET4P42948 560 aa10.13□□□□□ -0.79
RNP1YLL046C YOL036WQ08206 761 aa10.11□□□□□ -0.79
RNP1YLL046C SEC61P32915 480 aa10.09□□□□□ -0.79
RNP1YLL046C YNL035CP53962 389 aaKnown RBP10.09□□□□□ -0.79
RNP1YLL046C MRM1P25270 412 aa10.06□□□□□ -0.8
RNP1YLL046C TFG1P41895 735 aaPredicted RBP10.06□□□□□ -0.8
RNP1YLL046C PSD2P53037 1138 aaKnown RBP10.03□□□□□ -0.8
RNP1YLL046C YLR271WQ06152 274 aa10.02□□□□□ -0.81
RNP1YLL046C BCK2P33306 851 aa9.99□□□□□ -0.81
RNP1YLL046C SAP30P38429 201 aa9.94□□□□□ -0.82
RNP1YLL046C YMR1P47147 688 aaKnown RBP RIP-Chip data9.93□□□□□ -0.82not detected
RNP1YLL046C DBP1P24784 617 aaKnown RBP9.9□□□□□ -0.82
RNP1YLL046C CHL1P22516 861 aaPredicted RBP9.89□□□□□ -0.83
RNP1YLL046C VMA1P17255 1071 aaKnown RBP9.87□□□□□ -0.83
RNP1YLL046C YFR006WP43590 535 aa9.86□□□□□ -0.83
RNP1YLL046C JIP4Q03361 876 aa9.83□□□□□ -0.84
RNP1YLL046C YDL129WQ07555 291 aa9.83□□□□□ -0.84
RNP1YLL046C SAM3Q08986 587 aa9.83□□□□□ -0.84
RNP1YLL046C PRE3P38624 215 aa9.81□□□□□ -0.84
RNP1YLL046C DAN4P47179 1161 aa9.8□□□□□ -0.84
RNP1YLL046C VPS29P38759 282 aa9.79□□□□□ -0.84
RNP1YLL046C ABP1P15891 592 aaKnown RBP9.76□□□□□ -0.85
RNP1YLL046C RTG3P38165 486 aa9.76□□□□□ -0.85
RNP1YLL046C STS1P38637 319 aa9.75□□□□□ -0.85
RNP1YLL046C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
RNP1YLL046C GYP5Q12344 894 aa9.7□□□□□ -0.86
RNP1YLL046C HTA1P04911 132 aaKnown RBP9.69□□□□□ -0.86
RNP1YLL046C HTA2P04912 132 aa9.69□□□□□ -0.86
RNP1YLL046C XDJ1P39102 459 aa9.66□□□□□ -0.86
RNP1YLL046C VRP1P37370 817 aa9.65□□□□□ -0.86
RNP1YLL046C PTC4P38089 393 aa9.65□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 120.8 ms