Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.02■□□□□ 0.48
UPK1BO75841 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 MIR3648-1-201ENST00000615959 180 ntBASIC18.02■□□□□ 0.48
UPK1BO75841 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.02■□□□□ 0.48
UPK1BO75841 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
UPK1BO75841 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPK1BO75841 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPK1BO75841 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPK1BO75841 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
UPK1BO75841 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.02■□□□□ 0.47
UPK1BO75841 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UPK1BO75841 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
UPK1BO75841 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.01■□□□□ 0.47
UPK1BO75841 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
UPK1BO75841 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.01■□□□□ 0.47
UPK1BO75841 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1BO75841 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1BO75841 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1BO75841 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.01■□□□□ 0.47
UPK1BO75841 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.01■□□□□ 0.47
UPK1BO75841 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UPK1BO75841 AC133552.2-201ENST00000619106 1032 ntBASIC18.01■□□□□ 0.47
UPK1BO75841 AC022413.1-201ENST00000624602 984 ntBASIC18.01■□□□□ 0.47
UPK1BO75841 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
UPK1BO75841 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
UPK1BO75841 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1BO75841 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1BO75841 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.01■□□□□ 0.47
UPK1BO75841 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1BO75841 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
UPK1BO75841 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UPK1BO75841 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UPK1BO75841 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
UPK1BO75841 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18■□□□□ 0.47
UPK1BO75841 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18■□□□□ 0.47
UPK1BO75841 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18■□□□□ 0.47
UPK1BO75841 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 AC003102.1-202ENST00000563394 1796 ntBASIC18■□□□□ 0.47
UPK1BO75841 AC020916.1-201ENST00000587762 1774 ntBASIC18■□□□□ 0.47
UPK1BO75841 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18■□□□□ 0.47
UPK1BO75841 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UPK1BO75841 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18■□□□□ 0.47
UPK1BO75841 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18■□□□□ 0.47
UPK1BO75841 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18■□□□□ 0.47
UPK1BO75841 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1BO75841 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.99■□□□□ 0.47
UPK1BO75841 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.99■□□□□ 0.47
UPK1BO75841 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UPK1BO75841 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
UPK1BO75841 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UPK1BO75841 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.99■□□□□ 0.47
UPK1BO75841 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.99■□□□□ 0.47
UPK1BO75841 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.99■□□□□ 0.47
UPK1BO75841 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UPK1BO75841 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1BO75841 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UPK1BO75841 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.99■□□□□ 0.47
UPK1BO75841 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.98■□□□□ 0.47
UPK1BO75841 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 SPCS2P3-201ENST00000500401 656 ntBASIC17.98■□□□□ 0.47
UPK1BO75841 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.98■□□□□ 0.47
UPK1BO75841 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.98■□□□□ 0.47
UPK1BO75841 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.98■□□□□ 0.47
UPK1BO75841 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
UPK1BO75841 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 228.5 ms