RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 NISCHQ9Y2I1 1504 aa38.38■■■■□ 3.73
CHPF-203ENST00000535926 SHROOM4Q9ULL8 1493 aa32.95■■■□□ 2.87
CHPF-203ENST00000535926 ZCCHC6Q5VYS8 1495 aaKnown RBP32.48■■■□□ 2.79
CHPF-203ENST00000535926 SUPT5HO00267 1087 aaKnown RBP32.41■■■□□ 2.78
CHPF-203ENST00000535926 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
CHPF-203ENST00000535926 DCAF8L2P0C7V8 631 aa31.9■■■□□ 2.7
CHPF-203ENST00000535926 CHIC1Q5VXU3 224 aa31.6■■■□□ 2.65
CHPF-203ENST00000535926 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
CHPF-203ENST00000535926 DCAF1Q9Y4B6 1507 aa31.43■■■□□ 2.62
CHPF-203ENST00000535926 HRCP23327 699 aa30.87■■■□□ 2.53
CHPF-203ENST00000535926 PCGF6Q9BYE7 350 aa30.79■■■□□ 2.52
CHPF-203ENST00000535926 LOC105371045A0A1W2PR82 267 aa30.73■■■□□ 2.51
CHPF-203ENST00000535926 ABCC9O60706 1549 aa30.64■■■□□ 2.49
CHPF-203ENST00000535926 SCRIBQ14160 1630 aa30.51■■■□□ 2.48
CHPF-203ENST00000535926 RSF1Q96T23 1441 aaPredicted RBP30.5■■■□□ 2.47
CHPF-203ENST00000535926 PPARGC1BQ86YN6 1023 aaKnown RBP30.28■■■□□ 2.44
CHPF-203ENST00000535926 TRIM41Q8WV44 630 aa30.14■■■□□ 2.42
CHPF-203ENST00000535926 RB1CC1Q8TDY2 1594 aa30.13■■■□□ 2.41
CHPF-203ENST00000535926 TRIM26Q12899 539 aaPredicted RBP30.12■■■□□ 2.41
CHPF-203ENST00000535926 CECR2Q9BXF3 1484 aa30.01■■■□□ 2.39
CHPF-203ENST00000535926 NACADO15069 1562 aa29.99■■■□□ 2.39
CHPF-203ENST00000535926 FAM9AQ8IZU1 332 aaPredicted RBP29.95■■■□□ 2.38
CHPF-203ENST00000535926 MROH2BQ7Z745 1585 aa29.88■■■□□ 2.37
CHPF-203ENST00000535926 EHMT2Q96KQ7 1210 aa29.72■■■□□ 2.35
CHPF-203ENST00000535926 WIZO95785 1651 aa29.69■■■□□ 2.34
CHPF-203ENST00000535926 ZEB1P37275 1124 aaPredicted RBP29.46■■■□□ 2.31
CHPF-203ENST00000535926 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
CHPF-203ENST00000535926 EIF4G1Q04637 1599 aaKnown RBP29.34■■■□□ 2.29
CHPF-203ENST00000535926 TOP2AP11388 1531 aaKnown RBP29.19■■■□□ 2.26
CHPF-203ENST00000535926 CCDC88BA6NC98 1476 aa29.16■■■□□ 2.26
CHPF-203ENST00000535926 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
CHPF-203ENST00000535926 ABCC8Q09428 1581 aa29.12■■■□□ 2.25
CHPF-203ENST00000535926 SMARCA2P51531 1590 aa29.06■■■□□ 2.24
CHPF-203ENST00000535926 UNC13AQ9UPW8 1703 aa29■■■□□ 2.23
CHPF-203ENST00000535926 SOGA1O94964 1423 aa28.94■■■□□ 2.22
CHPF-203ENST00000535926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.94■■■□□ 2.22
CHPF-203ENST00000535926 PABPN1Q86U42 306 aaKnown RBP eCLIP28.87■■■□□ 2.21
CHPF-203ENST00000535926 WRNQ14191 1432 aaPredicted RBP eCLIP28.83■■■□□ 2.21
CHPF-203ENST00000535926 CEP162Q5TB80 1403 aa28.83■■■□□ 2.21
CHPF-203ENST00000535926 CCER1Q8TC90 406 aaPredicted RBP28.81■■■□□ 2.2
CHPF-203ENST00000535926 RUSC2Q8N2Y8 1516 aa28.8■■■□□ 2.2
CHPF-203ENST00000535926 CSRNP3Q8WYN3 585 aa28.79■■■□□ 2.2
CHPF-203ENST00000535926 TTBK1Q5TCY1 1321 aaPredicted RBP28.79■■■□□ 2.2
CHPF-203ENST00000535926 TNIKQ9UKE5 1360 aa28.78■■■□□ 2.2
CHPF-203ENST00000535926 BICRAQ9NZM4 1560 aa28.73■■■□□ 2.19
CHPF-203ENST00000535926 EEA1Q15075 1411 aa28.69■■■□□ 2.18
CHPF-203ENST00000535926 UBTFP17480 764 aaKnown RBP28.69■■■□□ 2.18
CHPF-203ENST00000535926 SCAF1Q9H7N4 1312 aaKnown RBP28.58■■■□□ 2.17
CHPF-203ENST00000535926 PEG3Q9GZU2 1588 aa28.57■■■□□ 2.16
CHPF-203ENST00000535926 GOLGA3Q08378 1498 aa28.53■■■□□ 2.16
CHPF-203ENST00000535926 SYNJ1O43426 1573 aa28.44■■■□□ 2.14
CHPF-203ENST00000535926 ATAD2BQ9ULI0 1458 aa28.42■■■□□ 2.14
CHPF-203ENST00000535926 CEP164Q9UPV0 1460 aa28.36■■■□□ 2.13
CHPF-203ENST00000535926 DIEXFQ68CQ4 756 aaKnown RBP28.35■■■□□ 2.13
CHPF-203ENST00000535926 BAZ1BQ9UIG0 1483 aaKnown RBP28.32■■■□□ 2.12
CHPF-203ENST00000535926 KIF21BO75037 1637 aa28.28■■■□□ 2.12
CHPF-203ENST00000535926 CLIP1P30622 1438 aa28.26■■■□□ 2.11
CHPF-203ENST00000535926 ACIN1Q9UKV3 1341 aaKnown RBP28.23■■■□□ 2.11
CHPF-203ENST00000535926 NEUROD1Q13562 356 aa28.22■■■□□ 2.11
CHPF-203ENST00000535926 RAPGEF2Q9Y4G8 1499 aa28.2■■■□□ 2.1
CHPF-203ENST00000535926 HNRNPUL2Q1KMD3 747 aaKnown RBP28.18■■■□□ 2.1
CHPF-203ENST00000535926 VPS8Q8N3P4 1428 aa28.14■■■□□ 2.1
CHPF-203ENST00000535926 RANGAP1P46060 587 aaPredicted RBP28.12■■■□□ 2.09
CHPF-203ENST00000535926 ZNF316A6NFI3 1004 aaPredicted RBP28.09■■■□□ 2.09
CHPF-203ENST00000535926 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
CHPF-203ENST00000535926 APLP2Q06481 763 aa28.02■■■□□ 2.08
CHPF-203ENST00000535926 PELP1Q8IZL8 1130 aaKnown RBP27.99■■■□□ 2.07
CHPF-203ENST00000535926 CENPBP07199 599 aaPredicted RBP27.96■■■□□ 2.07
CHPF-203ENST00000535926 GTF3C3Q9Y5Q9 886 aa27.92■■■□□ 2.06
CHPF-203ENST00000535926 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.06
CHPF-203ENST00000535926 PRXQ9BXM0 1461 aa27.89■■■□□ 2.05
CHPF-203ENST00000535926 NCAPD3P42695 1498 aa27.83■■■□□ 2.05
CHPF-203ENST00000535926 ERICH3Q5RHP9 1530 aa27.8■■■□□ 2.04
CHPF-203ENST00000535926 CUX1P39880 1505 aa27.79■■■□□ 2.04
CHPF-203ENST00000535926 ARAP1Q96P48 1450 aa27.79■■■□□ 2.04
CHPF-203ENST00000535926 KANK4Q5T7N3 995 aaPredicted RBP27.77■■■□□ 2.04
CHPF-203ENST00000535926 MIER1Q8N108 512 aa27.77■■■□□ 2.04
CHPF-203ENST00000535926 HMGXB3Q12766 1538 aa27.76■■■□□ 2.03
CHPF-203ENST00000535926 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.02
CHPF-203ENST00000535926 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
CHPF-203ENST00000535926 CFTRP13569 1480 aa27.66■■■□□ 2.02
CHPF-203ENST00000535926 DHX57Q6P158 1386 aaKnown RBP27.62■■■□□ 2.01
CHPF-203ENST00000535926 CLSPNQ9HAW4 1339 aa27.56■■■□□ 2
CHPF-203ENST00000535926 ARHGAP35Q9NRY4 1499 aa27.53■■■□□ 2
CHPF-203ENST00000535926 RRBP1Q9P2E9 1410 aaKnown RBP27.53■■■□□ 2
CHPF-203ENST00000535926 IGF1RP08069 1367 aa27.46■■□□□ 1.99
CHPF-203ENST00000535926 CCNB3Q8WWL7 1395 aa27.42■■□□□ 1.98
CHPF-203ENST00000535926 CUX2O14529 1486 aa27.41■■□□□ 1.98
CHPF-203ENST00000535926 ITGAEP38570 1179 aa27.37■■□□□ 1.97
CHPF-203ENST00000535926 CADPSQ9ULU8 1353 aa27.34■■□□□ 1.97
CHPF-203ENST00000535926 CARMIL1Q5VZK9 1371 aa27.3■■□□□ 1.96
CHPF-203ENST00000535926 FGD5Q6ZNL6 1462 aa27.26■■□□□ 1.95
CHPF-203ENST00000535926 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
CHPF-203ENST00000535926 RAB3GAP2Q9H2M9 1393 aa27.21■■□□□ 1.95
CHPF-203ENST00000535926 TIAM1Q13009 1591 aa27.2■■□□□ 1.94
CHPF-203ENST00000535926 MAP3K1Q13233 1512 aa27.17■■□□□ 1.94
CHPF-203ENST00000535926 LRRC9Q6ZRR7 1453 aa27.14■■□□□ 1.94
CHPF-203ENST00000535926 PHLDB1Q86UU1 1377 aa27.14■■□□□ 1.94
CHPF-203ENST00000535926 P3H3Q8IVL6 736 aa27.14■■□□□ 1.93
CHPF-203ENST00000535926 MAPKBP1O60336 1514 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms