RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
CHTOP-201ENST00000368686 HRCP23327 699 aa30.46■■■□□ 2.47
CHTOP-201ENST00000368686 PELP1Q8IZL8 1130 aaKnown RBP29.99■■■□□ 2.39
CHTOP-201ENST00000368686 PPARGC1BQ86YN6 1023 aaKnown RBP29.54■■■□□ 2.32
CHTOP-201ENST00000368686 PCGF6Q9BYE7 350 aa29.52■■■□□ 2.32
CHTOP-201ENST00000368686 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
CHTOP-201ENST00000368686 SUPT5HO00267 1087 aaKnown RBP29.34■■■□□ 2.29
CHTOP-201ENST00000368686 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
CHTOP-201ENST00000368686 CHIC1Q5VXU3 224 aa29.14■■■□□ 2.25
CHTOP-201ENST00000368686 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
CHTOP-201ENST00000368686 MYT1Q01538 1121 aa29■■■□□ 2.23
CHTOP-201ENST00000368686 SCAF1Q9H7N4 1312 aaKnown RBP28.85■■■□□ 2.21
CHTOP-201ENST00000368686 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
CHTOP-201ENST00000368686 TRIM26Q12899 539 aaPredicted RBP28.71■■■□□ 2.19
CHTOP-201ENST00000368686 ZEB1P37275 1124 aaPredicted RBP28.71■■■□□ 2.19
CHTOP-201ENST00000368686 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
CHTOP-201ENST00000368686 LOC105371045A0A1W2PR82 267 aa28.31■■■□□ 2.12
CHTOP-201ENST00000368686 ACIN1Q9UKV3 1341 aaKnown RBP28.16■■■□□ 2.1
CHTOP-201ENST00000368686 NEUROD1Q13562 356 aa27.95■■■□□ 2.07
CHTOP-201ENST00000368686 CENPBP07199 599 aaPredicted RBP27.84■■■□□ 2.05
CHTOP-201ENST00000368686 GTF3C3Q9Y5Q9 886 aa27.84■■■□□ 2.05
CHTOP-201ENST00000368686 DIEXFQ68CQ4 756 aaKnown RBP27.5■■□□□ 1.99
CHTOP-201ENST00000368686 TTBK1Q5TCY1 1321 aaPredicted RBP27.32■■□□□ 1.96
CHTOP-201ENST00000368686 CCER1Q8TC90 406 aaPredicted RBP27.31■■□□□ 1.96
CHTOP-201ENST00000368686 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.95
CHTOP-201ENST00000368686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.25■■□□□ 1.95
CHTOP-201ENST00000368686 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
CHTOP-201ENST00000368686 ABCC9O60706 1549 aa27.13■■□□□ 1.93
CHTOP-201ENST00000368686 FAM9AQ8IZU1 332 aaPredicted RBP27.05■■□□□ 1.92
CHTOP-201ENST00000368686 ZNF316A6NFI3 1004 aaPredicted RBP26.96■■□□□ 1.91
CHTOP-201ENST00000368686 YTHDC1Q96MU7 727 aaKnown RBP26.9■■□□□ 1.9
CHTOP-201ENST00000368686 RSF1Q96T23 1441 aaPredicted RBP26.85■■□□□ 1.89
CHTOP-201ENST00000368686 RB1CC1Q8TDY2 1594 aa26.81■■□□□ 1.88
CHTOP-201ENST00000368686 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
CHTOP-201ENST00000368686 CLSPNQ9HAW4 1339 aa26.78■■□□□ 1.88
CHTOP-201ENST00000368686 BCL11AQ9H165 835 aa26.76■■□□□ 1.87
CHTOP-201ENST00000368686 ANP32EQ9BTT0 268 aa26.72■■□□□ 1.87
CHTOP-201ENST00000368686 MIER1Q8N108 512 aa26.7■■□□□ 1.87
CHTOP-201ENST00000368686 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.86
CHTOP-201ENST00000368686 SUPT16HQ9Y5B9 1047 aaKnown RBP26.5■■□□□ 1.83
CHTOP-201ENST00000368686 TSHZ2Q9NRE2 1034 aa26.45■■□□□ 1.83
CHTOP-201ENST00000368686 SCRIBQ14160 1630 aa26.33■■□□□ 1.81
CHTOP-201ENST00000368686 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
CHTOP-201ENST00000368686 CEP162Q5TB80 1403 aa26.3■■□□□ 1.8
CHTOP-201ENST00000368686 TNIKQ9UKE5 1360 aa26.16■■□□□ 1.78
CHTOP-201ENST00000368686 EIF4G1Q04637 1599 aaKnown RBP26.15■■□□□ 1.78
CHTOP-201ENST00000368686 MROH2BQ7Z745 1585 aa25.97■■□□□ 1.75
CHTOP-201ENST00000368686 HNRNPUL2Q1KMD3 747 aaKnown RBP25.95■■□□□ 1.74
CHTOP-201ENST00000368686 CECR2Q9BXF3 1484 aa25.93■■□□□ 1.74
CHTOP-201ENST00000368686 WIZO95785 1651 aa25.92■■□□□ 1.74
CHTOP-201ENST00000368686 EEA1Q15075 1411 aa25.92■■□□□ 1.74
CHTOP-201ENST00000368686 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
CHTOP-201ENST00000368686 CCDC88BA6NC98 1476 aa25.88■■□□□ 1.73
CHTOP-201ENST00000368686 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
CHTOP-201ENST00000368686 RBM19Q9Y4C8 960 aaKnown RBP25.81■■□□□ 1.72
CHTOP-201ENST00000368686 GOLGA3Q08378 1498 aa25.8■■□□□ 1.72
CHTOP-201ENST00000368686 PRKCSHP14314 528 aaPredicted RBP25.79■■□□□ 1.72
CHTOP-201ENST00000368686 SOGA1O94964 1423 aa25.78■■□□□ 1.72
CHTOP-201ENST00000368686 UBTFP17480 764 aaKnown RBP25.77■■□□□ 1.72
CHTOP-201ENST00000368686 NACADO15069 1562 aa25.74■■□□□ 1.71
CHTOP-201ENST00000368686 BCANQ96GW7 911 aa25.71■■□□□ 1.71
CHTOP-201ENST00000368686 FKBP8Q14318 412 aa25.7■■□□□ 1.7
CHTOP-201ENST00000368686 DHX57Q6P158 1386 aaKnown RBP25.67■■□□□ 1.7
CHTOP-201ENST00000368686 VPS8Q8N3P4 1428 aa25.6■■□□□ 1.69
CHTOP-201ENST00000368686 NEFLP07196 543 aa25.6■■□□□ 1.69
CHTOP-201ENST00000368686 RUSC2Q8N2Y8 1516 aa25.57■■□□□ 1.68
CHTOP-201ENST00000368686 MYT1LQ9UL68 1186 aa25.56■■□□□ 1.68
CHTOP-201ENST00000368686 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
CHTOP-201ENST00000368686 MSH5O43196 834 aa25.55■■□□□ 1.68
CHTOP-201ENST00000368686 CLIP1P30622 1438 aa25.53■■□□□ 1.68
CHTOP-201ENST00000368686 APLP2Q06481 763 aa25.53■■□□□ 1.68
CHTOP-201ENST00000368686 FANCIQ9NVI1 1328 aa25.52■■□□□ 1.68
CHTOP-201ENST00000368686 KIF21BO75037 1637 aa25.52■■□□□ 1.68
CHTOP-201ENST00000368686 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
CHTOP-201ENST00000368686 ERICH6Q7L0X2 663 aa25.51■■□□□ 1.67
CHTOP-201ENST00000368686 KCNH8Q96L42 1107 aa25.49■■□□□ 1.67
CHTOP-201ENST00000368686 SMARCA2P51531 1590 aa25.43■■□□□ 1.66
CHTOP-201ENST00000368686 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
CHTOP-201ENST00000368686 ITGAEP38570 1179 aa25.34■■□□□ 1.65
CHTOP-201ENST00000368686 CUX2O14529 1486 aa25.32■■□□□ 1.64
CHTOP-201ENST00000368686 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
CHTOP-201ENST00000368686 CDK11AQ9UQ88 783 aaPredicted RBP25.24■■□□□ 1.63
CHTOP-201ENST00000368686 CCER2I3L3R5 266 aa25.24■■□□□ 1.63
CHTOP-201ENST00000368686 DEKP35659 375 aaKnown RBP25.23■■□□□ 1.63
CHTOP-201ENST00000368686 RRBP1Q9P2E9 1410 aaKnown RBP25.2■■□□□ 1.63
CHTOP-201ENST00000368686 DDX10Q13206 875 aaKnown RBP25.15■■□□□ 1.62
CHTOP-201ENST00000368686 TRIM52Q96A61 297 aa25.12■■□□□ 1.61
CHTOP-201ENST00000368686 PPP1R15AO75807 674 aaPredicted RBP25.11■■□□□ 1.61
CHTOP-201ENST00000368686 RAPGEF2Q9Y4G8 1499 aa25.11■■□□□ 1.61
CHTOP-201ENST00000368686 MAPKBP1O60336 1514 aa25.08■■□□□ 1.61
CHTOP-201ENST00000368686 ERICH6BQ5W0A0 696 aa25.07■■□□□ 1.6
CHTOP-201ENST00000368686 ANP32CO43423 234 aa25.06■■□□□ 1.6
CHTOP-201ENST00000368686 SYNJ1O43426 1573 aa25.04■■□□□ 1.6
CHTOP-201ENST00000368686 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
CHTOP-201ENST00000368686 CCNB3Q8WWL7 1395 aa25■■□□□ 1.59
CHTOP-201ENST00000368686 ARAP1Q96P48 1450 aa24.97■■□□□ 1.59
CHTOP-201ENST00000368686 ANO8Q9HCE9 1232 aaPredicted RBP24.97■■□□□ 1.59
CHTOP-201ENST00000368686 KANK4Q5T7N3 995 aaPredicted RBP24.97■■□□□ 1.59
CHTOP-201ENST00000368686 RAB3GAP2Q9H2M9 1393 aa24.94■■□□□ 1.58
CHTOP-201ENST00000368686 TIMELESSQ9UNS1 1208 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms