RNA–Protein interactions for RNA: ENST00000587757.5

LDLRAD4-211, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2 BASIC

Gene LDLRAD4, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-211ENST00000587757 NISCHQ9Y2I1 1504 aa42.1■■■■■ 4.33
LDLRAD4-211ENST00000587757 CCDC180Q9P1Z9 1646 aa36.59■■■■□ 3.45
LDLRAD4-211ENST00000587757 ZCCHC6Q5VYS8 1495 aaKnown RBP35.27■■■■□ 3.24
LDLRAD4-211ENST00000587757 DCAF8L2P0C7V8 631 aa35.14■■■■□ 3.22
LDLRAD4-211ENST00000587757 ABCC9O60706 1549 aa35.07■■■■□ 3.21
LDLRAD4-211ENST00000587757 DCAF1Q9Y4B6 1507 aa34.71■■■■□ 3.15
LDLRAD4-211ENST00000587757 SHROOM4Q9ULL8 1493 aa34.38■■■■□ 3.09
LDLRAD4-211ENST00000587757 MYO15BQ96JP2 1530 aa34.38■■■■□ 3.09
LDLRAD4-211ENST00000587757 NACADO15069 1562 aa34.25■■■■□ 3.07
LDLRAD4-211ENST00000587757 RB1CC1Q8TDY2 1594 aa34■■■■□ 3.03
LDLRAD4-211ENST00000587757 SCRIBQ14160 1630 aa33.78■■■■□ 3
LDLRAD4-211ENST00000587757 UNC13AQ9UPW8 1703 aa33.21■■■□□ 2.91
LDLRAD4-211ENST00000587757 PABPN1Q86U42 306 aaKnown RBP eCLIP33.19■■■□□ 2.9
LDLRAD4-211ENST00000587757 SUPT5HO00267 1087 aaKnown RBP33.04■■■□□ 2.88
LDLRAD4-211ENST00000587757 BICRAQ9NZM4 1560 aa33.03■■■□□ 2.88
LDLRAD4-211ENST00000587757 CECR2Q9BXF3 1484 aa32.83■■■□□ 2.85
LDLRAD4-211ENST00000587757 RSF1Q96T23 1441 aaPredicted RBP32.66■■■□□ 2.82
LDLRAD4-211ENST00000587757 MROH2BQ7Z745 1585 aa32.55■■■□□ 2.8
LDLRAD4-211ENST00000587757 BAZ1AQ9NRL2 1556 aaPredicted RBP32.46■■■□□ 2.79
LDLRAD4-211ENST00000587757 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
LDLRAD4-211ENST00000587757 WIZO95785 1651 aa32.22■■■□□ 2.75
LDLRAD4-211ENST00000587757 EIF4G1Q04637 1599 aaKnown RBP32.05■■■□□ 2.72
LDLRAD4-211ENST00000587757 ATAD2BQ9ULI0 1458 aa31.96■■■□□ 2.71
LDLRAD4-211ENST00000587757 PEG3Q9GZU2 1588 aa31.93■■■□□ 2.7
LDLRAD4-211ENST00000587757 SMARCA2P51531 1590 aa31.83■■■□□ 2.69
LDLRAD4-211ENST00000587757 TOP2AP11388 1531 aaKnown RBP31.83■■■□□ 2.69
LDLRAD4-211ENST00000587757 BAZ1BQ9UIG0 1483 aaKnown RBP31.73■■■□□ 2.67
LDLRAD4-211ENST00000587757 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
LDLRAD4-211ENST00000587757 CHIC1Q5VXU3 224 aa31.66■■■□□ 2.66
LDLRAD4-211ENST00000587757 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.66
LDLRAD4-211ENST00000587757 CC2D2AQ9P2K1 1620 aa31.63■■■□□ 2.65
LDLRAD4-211ENST00000587757 HMGXB3Q12766 1538 aa31.52■■■□□ 2.64
LDLRAD4-211ENST00000587757 DNAJC5BQ9UF47 199 aa31.31■■■□□ 2.6
LDLRAD4-211ENST00000587757 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
LDLRAD4-211ENST00000587757 CFTRP13569 1480 aa30.95■■■□□ 2.55
LDLRAD4-211ENST00000587757 CADPSQ9ULU8 1353 aa30.94■■■□□ 2.54
LDLRAD4-211ENST00000587757 HRCP23327 699 aa30.89■■■□□ 2.54
LDLRAD4-211ENST00000587757 ABCC8Q09428 1581 aa30.87■■■□□ 2.53
LDLRAD4-211ENST00000587757 PCGF6Q9BYE7 350 aa30.75■■■□□ 2.51
LDLRAD4-211ENST00000587757 NESP48681 1621 aa30.73■■■□□ 2.51
LDLRAD4-211ENST00000587757 WRNQ14191 1432 aaPredicted RBP eCLIP30.71■■■□□ 2.51
LDLRAD4-211ENST00000587757 LOC105371045A0A1W2PR82 267 aa30.69■■■□□ 2.5
LDLRAD4-211ENST00000587757 LAMC3Q9Y6N6 1575 aa30.56■■■□□ 2.48
LDLRAD4-211ENST00000587757 FANCD2Q9BXW9 1451 aa30.54■■■□□ 2.48
LDLRAD4-211ENST00000587757 FAM9AQ8IZU1 332 aaPredicted RBP30.53■■■□□ 2.48
LDLRAD4-211ENST00000587757 SYNJ1O43426 1573 aa30.52■■■□□ 2.48
LDLRAD4-211ENST00000587757 PRDM2Q13029 1718 aa30.47■■■□□ 2.47
LDLRAD4-211ENST00000587757 PDS5BQ9NTI5 1447 aa30.44■■■□□ 2.46
LDLRAD4-211ENST00000587757 CUX1P39880 1505 aa30.42■■■□□ 2.46
LDLRAD4-211ENST00000587757 TOP2BQ02880 1626 aa30.38■■■□□ 2.45
LDLRAD4-211ENST00000587757 SOGA1O94964 1423 aa30.34■■■□□ 2.45
LDLRAD4-211ENST00000587757 CEP164Q9UPV0 1460 aa30.32■■■□□ 2.44
LDLRAD4-211ENST00000587757 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
LDLRAD4-211ENST00000587757 RUSC2Q8N2Y8 1516 aa30.24■■■□□ 2.43
LDLRAD4-211ENST00000587757 PPARGC1BQ86YN6 1023 aaKnown RBP30.22■■■□□ 2.43
LDLRAD4-211ENST00000587757 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
LDLRAD4-211ENST00000587757 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
LDLRAD4-211ENST00000587757 TOPBP1Q92547 1522 aa30.17■■■□□ 2.42
LDLRAD4-211ENST00000587757 TRIM26Q12899 539 aaPredicted RBP30.16■■■□□ 2.42
LDLRAD4-211ENST00000587757 EHMT2Q96KQ7 1210 aa30.15■■■□□ 2.42
LDLRAD4-211ENST00000587757 CSRNP3Q8WYN3 585 aa30.14■■■□□ 2.42
LDLRAD4-211ENST00000587757 DNMBPQ6XZF7 1577 aa30.13■■■□□ 2.41
LDLRAD4-211ENST00000587757 FGD5Q6ZNL6 1462 aa30.13■■■□□ 2.41
LDLRAD4-211ENST00000587757 EEA1Q15075 1411 aa30.09■■■□□ 2.41
LDLRAD4-211ENST00000587757 ERCC6Q03468 1493 aa30.04■■■□□ 2.4
LDLRAD4-211ENST00000587757 POLA1P09884 1462 aaPredicted RBP30.02■■■□□ 2.4
LDLRAD4-211ENST00000587757 MRC2Q9UBG0 1479 aa30.01■■■□□ 2.39
LDLRAD4-211ENST00000587757 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
LDLRAD4-211ENST00000587757 KIF27Q86VH2 1401 aa29.95■■■□□ 2.38
LDLRAD4-211ENST00000587757 CUX2O14529 1486 aa29.93■■■□□ 2.38
LDLRAD4-211ENST00000587757 ABCA10Q8WWZ4 1543 aa29.83■■■□□ 2.37
LDLRAD4-211ENST00000587757 WDR62O43379 1518 aa29.82■■■□□ 2.36
LDLRAD4-211ENST00000587757 IGF1RP08069 1367 aa29.8■■■□□ 2.36
LDLRAD4-211ENST00000587757 TDRD9Q8NDG6 1382 aaKnown RBP29.78■■■□□ 2.36
LDLRAD4-211ENST00000587757 UBTFP17480 764 aaKnown RBP29.76■■■□□ 2.35
LDLRAD4-211ENST00000587757 THOC2Q8NI27 1593 aaKnown RBP29.74■■■□□ 2.35
LDLRAD4-211ENST00000587757 PRXQ9BXM0 1461 aa29.69■■■□□ 2.34
LDLRAD4-211ENST00000587757 GOLGA3Q08378 1498 aa29.68■■■□□ 2.34
LDLRAD4-211ENST00000587757 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
LDLRAD4-211ENST00000587757 TARBP1Q13395 1621 aaKnown RBP29.68■■■□□ 2.34
LDLRAD4-211ENST00000587757 KIF21BO75037 1637 aa29.64■■■□□ 2.34
LDLRAD4-211ENST00000587757 TNIKQ9UKE5 1360 aa29.62■■■□□ 2.33
LDLRAD4-211ENST00000587757 IFT140Q96RY7 1462 aa29.62■■■□□ 2.33
LDLRAD4-211ENST00000587757 CARMIL1Q5VZK9 1371 aa29.61■■■□□ 2.33
LDLRAD4-211ENST00000587757 GAPVD1Q14C86 1478 aa29.6■■■□□ 2.33
LDLRAD4-211ENST00000587757 WDR97A6NE52 1622 aa29.6■■■□□ 2.33
LDLRAD4-211ENST00000587757 AQRO60306 1485 aaKnown RBP eCLIP29.6■■■□□ 2.33
LDLRAD4-211ENST00000587757 ZNF608Q9ULD9 1512 aaPredicted RBP29.55■■■□□ 2.32
LDLRAD4-211ENST00000587757 ZEB1P37275 1124 aaPredicted RBP29.53■■■□□ 2.32
LDLRAD4-211ENST00000587757 ABCA5Q8WWZ7 1642 aa29.52■■■□□ 2.32
LDLRAD4-211ENST00000587757 ERICH3Q5RHP9 1530 aa29.5■■■□□ 2.31
LDLRAD4-211ENST00000587757 CEP162Q5TB80 1403 aa29.44■■■□□ 2.3
LDLRAD4-211ENST00000587757 RANGAP1P46060 587 aaPredicted RBP29.42■■■□□ 2.3
LDLRAD4-211ENST00000587757 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
LDLRAD4-211ENST00000587757 CUL7Q14999 1698 aa29.32■■■□□ 2.28
LDLRAD4-211ENST00000587757 EIF4G3O43432 1585 aaKnown RBP29.29■■■□□ 2.28
LDLRAD4-211ENST00000587757 FHAD1B1AJZ9 1412 aa29.27■■■□□ 2.28
LDLRAD4-211ENST00000587757 CLIP1P30622 1438 aa29.27■■■□□ 2.28
LDLRAD4-211ENST00000587757 PBRM1Q86U86 1689 aa29.26■■■□□ 2.27
LDLRAD4-211ENST00000587757 SNAPC4Q5SXM2 1469 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms