Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.22■□□□□ 0.83
ITM2AO43736 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.22■□□□□ 0.83
ITM2AO43736 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ITM2AO43736 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.22■□□□□ 0.83
ITM2AO43736 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.21■□□□□ 0.83
ITM2AO43736 AC061975.6-201ENST00000579045 1553 ntBASIC20.21■□□□□ 0.83
ITM2AO43736 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.21■□□□□ 0.83
ITM2AO43736 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ITM2AO43736 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ITM2AO43736 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.21■□□□□ 0.83
ITM2AO43736 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITM2AO43736 UNC93B3-201ENST00000308076 687 ntBASIC20.21■□□□□ 0.83
ITM2AO43736 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ITM2AO43736 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITM2AO43736 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ITM2AO43736 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ITM2AO43736 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ITM2AO43736 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.21■□□□□ 0.83
ITM2AO43736 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.21■□□□□ 0.83
ITM2AO43736 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ITM2AO43736 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITM2AO43736 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITM2AO43736 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ITM2AO43736 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ITM2AO43736 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ITM2AO43736 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ITM2AO43736 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.2■□□□□ 0.82
ITM2AO43736 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.2■□□□□ 0.82
ITM2AO43736 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.2■□□□□ 0.82
ITM2AO43736 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 AC105233.4-201ENST00000642045 216 ntBASIC20.2■□□□□ 0.82
ITM2AO43736 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.2■□□□□ 0.82
ITM2AO43736 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.2■□□□□ 0.82
ITM2AO43736 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.2■□□□□ 0.82
ITM2AO43736 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.2■□□□□ 0.82
ITM2AO43736 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITM2AO43736 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITM2AO43736 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ITM2AO43736 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITM2AO43736 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITM2AO43736 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITM2AO43736 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITM2AO43736 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITM2AO43736 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ITM2AO43736 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITM2AO43736 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITM2AO43736 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.19■□□□□ 0.82
ITM2AO43736 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.19■□□□□ 0.82
ITM2AO43736 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.19■□□□□ 0.82
ITM2AO43736 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITM2AO43736 AC024257.2-201ENST00000549699 147 ntBASIC20.19■□□□□ 0.82
ITM2AO43736 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.19■□□□□ 0.82
ITM2AO43736 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.18■□□□□ 0.82
ITM2AO43736 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 TCF3P1-201ENST00000423021 1937 ntBASIC20.18■□□□□ 0.82
ITM2AO43736 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ITM2AO43736 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.18■□□□□ 0.82
ITM2AO43736 AL136116.3-201ENST00000402907 1138 ntBASIC20.18■□□□□ 0.82
ITM2AO43736 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ITM2AO43736 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.18■□□□□ 0.82
ITM2AO43736 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 AC087289.5-201ENST00000586076 3175 ntBASIC20.18■□□□□ 0.82
ITM2AO43736 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.18■□□□□ 0.82
ITM2AO43736 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ITM2AO43736 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ITM2AO43736 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ITM2AO43736 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ITM2AO43736 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ITM2AO43736 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ITM2AO43736 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ITM2AO43736 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ITM2AO43736 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ITM2AO43736 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ITM2AO43736 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ITM2AO43736 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ITM2AO43736 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.17■□□□□ 0.82
ITM2AO43736 EEF1DP3-203ENST00000566025 782 ntBASIC20.17■□□□□ 0.82
ITM2AO43736 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms