Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PPARGC1BQ86YN6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
PPARGC1BQ86YN6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
PPARGC1BQ86YN6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC32.57■■■□□ 2.8
PPARGC1BQ86YN6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC32.57■■■□□ 2.8
PPARGC1BQ86YN6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
PPARGC1BQ86YN6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
PPARGC1BQ86YN6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
PPARGC1BQ86YN6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PPARGC1BQ86YN6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PPARGC1BQ86YN6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC32.56■■■□□ 2.8
PPARGC1BQ86YN6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC32.56■■■□□ 2.8
PPARGC1BQ86YN6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
PPARGC1BQ86YN6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC32.56■■■□□ 2.8
PPARGC1BQ86YN6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
PPARGC1BQ86YN6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 AC004911.1-201ENST00000416316 871 ntBASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 AC092666.2-201ENST00000613287 246 ntBASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PPARGC1BQ86YN6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 AL049796.1-201ENST00000565336 1766 ntBASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
PPARGC1BQ86YN6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 UQCRFS1P1-201ENST00000435169 820 ntBASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 AC007952.6-201ENST00000573168 2673 ntBASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 AC003957.1-201ENST00000625108 2673 ntBASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC32.52■■■□□ 2.8
PPARGC1BQ86YN6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
PPARGC1BQ86YN6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
PPARGC1BQ86YN6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
PPARGC1BQ86YN6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PPARGC1BQ86YN6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
PPARGC1BQ86YN6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
PPARGC1BQ86YN6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
PPARGC1BQ86YN6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
PPARGC1BQ86YN6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC32.51■■■□□ 2.79
PPARGC1BQ86YN6 AC008175.2-201ENST00000612840 297 ntBASIC32.51■■■□□ 2.79
PPARGC1BQ86YN6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC32.51■■■□□ 2.79
PPARGC1BQ86YN6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC32.51■■■□□ 2.79
PPARGC1BQ86YN6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
PPARGC1BQ86YN6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PPARGC1BQ86YN6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms