Protein–RNA interactions for Protein: Q03654

CEF1, Pre-mRNA-splicing factor CEF1, yeastyeast

Predicted RBP Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CEF1Q03654 YMR122W-AYMR122W-A 255 nt3.53□□□□□ -1.84
CEF1Q03654 RPS16AYMR143W 432 nt3.53□□□□□ -1.84
CEF1Q03654 RPL23AYBL087C 414 nt3.53□□□□□ -1.84
CEF1Q03654 YNR021WYNR021W 1215 nt3.53□□□□□ -1.84
CEF1Q03654 RPL20BYOR312C 519 nt3.53□□□□□ -1.84
CEF1Q03654 RPL11AYPR102C 525 nt3.53□□□□□ -1.84
CEF1Q03654 DSE4YNR067C 3354 nt3.53□□□□□ -1.84
CEF1Q03654 SHE4YOR035C 2370 nt3.53□□□□□ -1.84
CEF1Q03654 PSK1YAL017W 4071 nt3.53□□□□□ -1.84
CEF1Q03654 YHR080CYHR080C 4038 nt3.53□□□□□ -1.85
CEF1Q03654 CIN8YEL061C 3003 nt3.52□□□□□ -1.85
CEF1Q03654 PKH1YDR490C 2301 nt3.52□□□□□ -1.85
CEF1Q03654 YHL046W-AYHL046W-A 327 nt3.52□□□□□ -1.85
CEF1Q03654 GOT1YMR292W 417 nt3.52□□□□□ -1.85
CEF1Q03654 NTC20YBR188C 423 nt3.52□□□□□ -1.85
CEF1Q03654 SWC4YGR002C 1431 nt3.52□□□□□ -1.85
CEF1Q03654 STI1YOR027W 1770 nt3.51□□□□□ -1.85
CEF1Q03654 SNA4YDL123W 423 nt3.51□□□□□ -1.85
CEF1Q03654 tK(UUU)DtK(UUU)D 73 nt3.51□□□□□ -1.85
CEF1Q03654 tK(UUU)G1tK(UUU)G1 73 nt3.51□□□□□ -1.85
CEF1Q03654 tK(UUU)G2tK(UUU)G2 73 nt3.51□□□□□ -1.85
CEF1Q03654 tK(UUU)KtK(UUU)K 73 nt3.51□□□□□ -1.85
CEF1Q03654 tK(UUU)LtK(UUU)L 73 nt3.51□□□□□ -1.85
CEF1Q03654 tK(UUU)OtK(UUU)O 73 nt3.51□□□□□ -1.85
CEF1Q03654 tK(UUU)PtK(UUU)P 73 nt3.51□□□□□ -1.85
CEF1Q03654 GET1YGL020C 708 nt3.51□□□□□ -1.85
CEF1Q03654 DBF20YPR111W 1695 nt3.51□□□□□ -1.85
CEF1Q03654 NDT80YHR124W 1884 nt3.51□□□□□ -1.85
CEF1Q03654 REC8YPR007C 2043 nt3.51□□□□□ -1.85
CEF1Q03654 NET1YJL076W 3570 nt3.51□□□□□ -1.85
CEF1Q03654 PRP8YHR165C 7242 nt3.5□□□□□ -1.85
CEF1Q03654 SOK1YDR006C 2706 nt3.5□□□□□ -1.85
CEF1Q03654 YER119C-AYER119C-A 372 nt3.5□□□□□ -1.85
CEF1Q03654 MIC19YFR011C 513 nt3.5□□□□□ -1.85
CEF1Q03654 USE1YGL098W 738 nt3.5□□□□□ -1.85
CEF1Q03654 tV(CAC)DtV(CAC)D 73 nt3.5□□□□□ -1.85
CEF1Q03654 tV(CAC)HtV(CAC)H 73 nt3.5□□□□□ -1.85
CEF1Q03654 YKL063CYKL063C 504 nt3.5□□□□□ -1.85
CEF1Q03654 MRP49YKL167C 414 nt3.5□□□□□ -1.85
CEF1Q03654 YMR001C-AYMR001C-A 231 nt3.5□□□□□ -1.85
CEF1Q03654 RPL20AYMR242C 519 nt3.5□□□□□ -1.85
CEF1Q03654 YOR293C-AYOR293C-A 150 nt3.5□□□□□ -1.85
CEF1Q03654 SVS1YPL163C 783 nt3.5□□□□□ -1.85
CEF1Q03654 STE23YLR389C 3084 nt3.5□□□□□ -1.85
CEF1Q03654 PUF6YDR496C 1971 nt3.49□□□□□ -1.85
CEF1Q03654 FRE2YKL220C 2136 nt3.49□□□□□ -1.85
CEF1Q03654 BOI1YBL085W 2943 nt3.49□□□□□ -1.85
CEF1Q03654 JJJ2YJL162C 1752 nt3.49□□□□□ -1.85
CEF1Q03654 RSN1YMR266W 2862 nt3.49□□□□□ -1.85
CEF1Q03654 FAP7YDL166C 594 nt3.49□□□□□ -1.85
CEF1Q03654 YDR537CYDR537C 606 nt3.49□□□□□ -1.85
CEF1Q03654 YGR017WYGR017W 894 nt3.49□□□□□ -1.85
CEF1Q03654 RAD33YML011C 534 nt3.49□□□□□ -1.85
CEF1Q03654 CTK3YML112W 891 nt3.49□□□□□ -1.85
CEF1Q03654 DDR48YMR173W 1293 nt3.49□□□□□ -1.85
CEF1Q03654 YPR050CYPR050C 414 nt3.49□□□□□ -1.85
CEF1Q03654 YPR096CYPR096C 303 nt3.49□□□□□ -1.85
CEF1Q03654 TRS120YDR407C 3870 nt3.49□□□□□ -1.85
CEF1Q03654 ROM1YGR070W 3468 nt3.49□□□□□ -1.85
CEF1Q03654 TFB1YDR311W 1929 nt3.48□□□□□ -1.85
CEF1Q03654 MUD2YKL074C 1584 nt3.48□□□□□ -1.85
CEF1Q03654 TSC11YER093C 4293 nt3.48□□□□□ -1.85
CEF1Q03654 YDR193WYDR193W 399 nt3.48□□□□□ -1.85
CEF1Q03654 YAP3YHL009C 993 nt3.48□□□□□ -1.85
CEF1Q03654 RPI1YIL119C 1224 nt3.48□□□□□ -1.85
CEF1Q03654 VPH2YKL119C 648 nt3.48□□□□□ -1.85
CEF1Q03654 AFB1YLR040C 675 nt3.48□□□□□ -1.85
CEF1Q03654 YMR304C-AYMR304C-A 351 nt3.48□□□□□ -1.85
CEF1Q03654 RPL16BYNL069C 597 nt3.48□□□□□ -1.85
CEF1Q03654 NGL1YOL042W 1092 nt3.48□□□□□ -1.85
CEF1Q03654 UTP15YMR093W 1542 nt3.48□□□□□ -1.85
CEF1Q03654 ARK1YNL020C 1917 nt3.48□□□□□ -1.85
CEF1Q03654 STU2YLR045C 2667 nt3.47□□□□□ -1.85
CEF1Q03654 POL2YNL262W 6669 nt3.47□□□□□ -1.85
CEF1Q03654 RGR1YLR071C 3249 nt3.47□□□□□ -1.85
CEF1Q03654 TGL3YMR313C 1929 nt3.47□□□□□ -1.85
CEF1Q03654 RRM3YHR031C 2172 nt3.47□□□□□ -1.85
CEF1Q03654 YER079WYER079W 633 nt3.47□□□□□ -1.85
CEF1Q03654 TCD1YHR003C 1290 nt3.47□□□□□ -1.85
CEF1Q03654 YIL054WYIL054W 318 nt3.47□□□□□ -1.85
CEF1Q03654 YJL086CYJL086C 369 nt3.47□□□□□ -1.85
CEF1Q03654 AIM29YKR074W 468 nt3.47□□□□□ -1.85
CEF1Q03654 HRI1YLR301W 735 nt3.47□□□□□ -1.85
CEF1Q03654 MSS18YPR134W 807 nt3.47□□□□□ -1.85
CEF1Q03654 YJL132WYJL132W 2253 nt3.47□□□□□ -1.85
CEF1Q03654 BIT61YJL058C 1632 nt3.47□□□□□ -1.85
CEF1Q03654 FAR1YJL157C 2493 nt3.47□□□□□ -1.85
CEF1Q03654 RUD3YOR216C 1455 nt3.47□□□□□ -1.85
CEF1Q03654 SRB4YER022W 2064 nt3.47□□□□□ -1.85
CEF1Q03654 VTC4YJL012C 2166 nt3.46□□□□□ -1.85
CEF1Q03654 SEN54YPL083C 1404 nt3.46□□□□□ -1.86
CEF1Q03654 IRC2YDR112W 309 nt3.46□□□□□ -1.86
CEF1Q03654 IES5YER092W 378 nt3.46□□□□□ -1.86
CEF1Q03654 RTR1YER139C 681 nt3.46□□□□□ -1.86
CEF1Q03654 YLR297WYLR297W 390 nt3.46□□□□□ -1.86
CEF1Q03654 YMR013C-AYMR013C-A 150 nt3.46□□□□□ -1.86
CEF1Q03654 CAT5YOR125C 702 nt3.46□□□□□ -1.86
CEF1Q03654 snR42snR42 351 nt3.46□□□□□ -1.86
CEF1Q03654 CCT7YJL111W 1653 nt3.46□□□□□ -1.86
CEF1Q03654 SPO14YKR031C 5052 nt3.45□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 67.5 ms