RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C DRS1P32892 752 aaKnown RBP7□□□□□ -1.29
SOK1YDR006C MTC1P47018 478 aaKnown RBP6.68□□□□□ -1.34
SOK1YDR006C FAP1P53971 965 aa6.4□□□□□ -1.38
SOK1YDR006C BFR2Q06631 534 aaKnown RBP6.16□□□□□ -1.42
SOK1YDR006C TFA1P36100 482 aa6.1□□□□□ -1.43
SOK1YDR006C AVT3P36062 692 aa5.99□□□□□ -1.45
SOK1YDR006C PRY3P47033 881 aa5.97□□□□□ -1.45
SOK1YDR006C DIP2Q12220 943 aaPredicted RBP5.87□□□□□ -1.47
SOK1YDR006C AAD16Q02895 342 aa5.76□□□□□ -1.49
SOK1YDR006C PRI1P10363 409 aa5.67□□□□□ -1.5
SOK1YDR006C ISW2Q08773 1120 aa5.67□□□□□ -1.5
SOK1YDR006C RPG1P38249 964 aaKnown RBP5.58□□□□□ -1.52
SOK1YDR006C HAA1Q12753 694 aaKnown RBP5.53□□□□□ -1.52
SOK1YDR006C TSR3Q12094 313 aaKnown RBP5.47□□□□□ -1.53
SOK1YDR006C RSE1Q04693 1361 aaKnown RBP5.36□□□□□ -1.55
SOK1YDR006C MRPL32P25348 183 aa5.32□□□□□ -1.56
SOK1YDR006C YCK3P39962 524 aa5.3□□□□□ -1.56
SOK1YDR006C RQC2Q12532 1038 aaKnown RBP5.3□□□□□ -1.56
SOK1YDR006C REB1P21538 810 aa5.25□□□□□ -1.57
SOK1YDR006C RPL17AP05740 184 aaKnown RBP5.2□□□□□ -1.58
SOK1YDR006C RPL17BP46990 184 aaKnown RBP5.2□□□□□ -1.58
SOK1YDR006C SPT21P35209 758 aa5.19□□□□□ -1.58
SOK1YDR006C DMA1P38823 416 aa5.17□□□□□ -1.58
SOK1YDR006C RIM101P33400 625 aa5.12□□□□□ -1.59
SOK1YDR006C TAF7Q05021 590 aa5.11□□□□□ -1.59
SOK1YDR006C PTP3P40048 928 aa5.1□□□□□ -1.59
SOK1YDR006C YGL015CP33199 130 aa5.08□□□□□ -1.6
SOK1YDR006C OXP1P28273 1286 aa5.05□□□□□ -1.6
SOK1YDR006C SSP1P38871 571 aa4.95□□□□□ -1.62
SOK1YDR006C YKR023WP36119 530 aaKnown RBP4.95□□□□□ -1.62
SOK1YDR006C YLR271WQ06152 274 aa4.94□□□□□ -1.62
SOK1YDR006C YAH1Q12184 172 aaKnown RBP4.88□□□□□ -1.63
SOK1YDR006C CDC27P38042 758 aa4.86□□□□□ -1.63
SOK1YDR006C DCD1P06773 312 aa4.84□□□□□ -1.63
SOK1YDR006C CST9Q06032 482 aa4.84□□□□□ -1.63
SOK1YDR006C SAS10Q12136 610 aaPredicted RBP4.81□□□□□ -1.64
SOK1YDR006C HOP09932 586 aa4.8□□□□□ -1.64
SOK1YDR006C TFC8Q12308 588 aa4.78□□□□□ -1.64
SOK1YDR006C MAP2P38174 421 aaKnown RBP4.78□□□□□ -1.64
SOK1YDR006C UBP10P53874 792 aaPredicted RBP4.76□□□□□ -1.65
SOK1YDR006C LEO1P38439 464 aa4.76□□□□□ -1.65
SOK1YDR006C PSD2P53037 1138 aaKnown RBP4.75□□□□□ -1.65
SOK1YDR006C ABP1P15891 592 aaKnown RBP4.74□□□□□ -1.65
SOK1YDR006C MGA2P40578 1113 aa4.74□□□□□ -1.65
SOK1YDR006C RSM7P47150 247 aa4.73□□□□□ -1.65
SOK1YDR006C SCY1P53009 804 aa4.71□□□□□ -1.66
SOK1YDR006C YIL055CP40523 627 aaKnown RBP4.7□□□□□ -1.66
SOK1YDR006C RCR1P38212 213 aa4.69□□□□□ -1.66
SOK1YDR006C TIF4632P39936 914 aaKnown RBP4.69□□□□□ -1.66
SOK1YDR006C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
SOK1YDR006C BCH2P36122 765 aa4.68□□□□□ -1.66
SOK1YDR006C LEU3P08638 886 aa4.68□□□□□ -1.66
SOK1YDR006C RAM2P29703 316 aa4.67□□□□□ -1.66
SOK1YDR006C SLX5P32828 619 aaKnown RBP4.67□□□□□ -1.66
SOK1YDR006C AI2P03876 854 aa4.66□□□□□ -1.66
SOK1YDR006C BUD31P25337 157 aaPredicted RBP4.62□□□□□ -1.67
SOK1YDR006C UBP9P39967 754 aa4.6□□□□□ -1.67
SOK1YDR006C SIS1P25294 352 aaKnown RBP4.58□□□□□ -1.68
SOK1YDR006C EPS1P40557 701 aa4.58□□□□□ -1.68
SOK1YDR006C IFH1P39520 1085 aa4.57□□□□□ -1.68
SOK1YDR006C BDF1P35817 686 aa4.57□□□□□ -1.68
SOK1YDR006C DMA2P53924 522 aa4.56□□□□□ -1.68
SOK1YDR006C YPR148CQ06523 435 aa4.55□□□□□ -1.68
SOK1YDR006C MRM1P25270 412 aa4.55□□□□□ -1.68
SOK1YDR006C TGL3P40308 642 aa4.55□□□□□ -1.68
SOK1YDR006C SET1P38827 1080 aaKnown RBP4.53□□□□□ -1.68
SOK1YDR006C ORC1P54784 914 aaPredicted RBP4.52□□□□□ -1.69
SOK1YDR006C IOC4Q04213 475 aa4.51□□□□□ -1.69
SOK1YDR006C VPS29P38759 282 aa4.51□□□□□ -1.69
SOK1YDR006C VPS70P47161 811 aa4.48□□□□□ -1.69
SOK1YDR006C BBC1P47068 1157 aa4.47□□□□□ -1.69
SOK1YDR006C MAK11P20484 414 aaKnown RBP4.45□□□□□ -1.7
SOK1YDR006C EDS1P38073 919 aa4.45□□□□□ -1.7
SOK1YDR006C RPN1P38764 993 aaKnown RBP4.45□□□□□ -1.7
SOK1YDR006C STS1P38637 319 aa4.44□□□□□ -1.7
SOK1YDR006C DSF2P38213 736 aa4.44□□□□□ -1.7
SOK1YDR006C RTG3P38165 486 aa4.43□□□□□ -1.7
SOK1YDR006C COQ8P27697 501 aa4.41□□□□□ -1.7
SOK1YDR006C YOR238WQ08634 303 aa4.4□□□□□ -1.7
SOK1YDR006C NUP42P49686 430 aaKnown RBP4.4□□□□□ -1.71
SOK1YDR006C SPB4P25808 606 aaPredicted RBP4.39□□□□□ -1.71
SOK1YDR006C DIT2P21595 489 aa4.39□□□□□ -1.71
SOK1YDR006C PBS2P08018 668 aa4.38□□□□□ -1.71
SOK1YDR006C GTT3P39996 337 aa4.38□□□□□ -1.71
SOK1YDR006C CKB1P43639 278 aa4.37□□□□□ -1.71
SOK1YDR006C NAP1P25293 417 aaKnown RBP4.37□□□□□ -1.71
SOK1YDR006C WSC3Q12215 556 aa4.37□□□□□ -1.71
SOK1YDR006C YFR006WP43590 535 aa4.36□□□□□ -1.71
SOK1YDR006C GLC3P32775 704 aa4.36□□□□□ -1.71
SOK1YDR006C KIN1P13185 1064 aa4.35□□□□□ -1.71
SOK1YDR006C YBL029C-AQ3E756 94 aa4.34□□□□□ -1.71
SOK1YDR006C GUA1P38625 525 aaKnown RBP4.34□□□□□ -1.72
SOK1YDR006C YAP5P40574 245 aa4.33□□□□□ -1.72
SOK1YDR006C YDR090CQ03193 310 aa4.33□□□□□ -1.72
SOK1YDR006C DBP1P24784 617 aaKnown RBP4.32□□□□□ -1.72
SOK1YDR006C IES2P40154 320 aa4.32□□□□□ -1.72
SOK1YDR006C YNR021WP53723 404 aaKnown RBP4.32□□□□□ -1.72
SOK1YDR006C SPP1Q03012 353 aa4.31□□□□□ -1.72
SOK1YDR006C YMR1P47147 688 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SOK1YDR006C MIF2P35201 549 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms