Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.38■□□□□ 0.53
CSNK1A1P48729 KRT18P11-201ENST00000435214 1283 ntBASIC18.38■□□□□ 0.53
CSNK1A1P48729 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.38■□□□□ 0.53
CSNK1A1P48729 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.38■□□□□ 0.53
CSNK1A1P48729 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.38■□□□□ 0.53
CSNK1A1P48729 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1A1P48729 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1A1P48729 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1A1P48729 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1A1P48729 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1A1P48729 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1A1P48729 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.38■□□□□ 0.53
CSNK1A1P48729 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CSNK1A1P48729 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CSNK1A1P48729 AC016769.1-201ENST00000409132 1010 ntBASIC18.37■□□□□ 0.53
CSNK1A1P48729 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.37■□□□□ 0.53
CSNK1A1P48729 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CSNK1A1P48729 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.37■□□□□ 0.53
CSNK1A1P48729 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.37■□□□□ 0.53
CSNK1A1P48729 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.37■□□□□ 0.53
CSNK1A1P48729 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.37■□□□□ 0.53
CSNK1A1P48729 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.37■□□□□ 0.53
CSNK1A1P48729 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1A1P48729 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CSNK1A1P48729 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1A1P48729 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CSNK1A1P48729 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1A1P48729 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1A1P48729 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.36■□□□□ 0.53
CSNK1A1P48729 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CSNK1A1P48729 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CSNK1A1P48729 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.36■□□□□ 0.53
CSNK1A1P48729 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.36■□□□□ 0.53
CSNK1A1P48729 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.36■□□□□ 0.53
CSNK1A1P48729 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CSNK1A1P48729 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CSNK1A1P48729 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1A1P48729 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1A1P48729 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1A1P48729 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1A1P48729 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1A1P48729 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1A1P48729 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1A1P48729 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1A1P48729 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1A1P48729 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1A1P48729 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.34■□□□□ 0.53
CSNK1A1P48729 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1A1P48729 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 RBM17P2-201ENST00000616397 1405 ntBASIC18.34■□□□□ 0.53
CSNK1A1P48729 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1A1P48729 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1A1P48729 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1A1P48729 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.34■□□□□ 0.53
CSNK1A1P48729 AC243732.1-201ENST00000612648 864 ntBASIC18.34■□□□□ 0.53
CSNK1A1P48729 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1A1P48729 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1A1P48729 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CSNK1A1P48729 AC006128.1-201ENST00000624704 1661 ntBASIC18.34■□□□□ 0.53
CSNK1A1P48729 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1A1P48729 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1A1P48729 PLK5-205ENST00000642079 1969 ntBASIC18.33■□□□□ 0.53
CSNK1A1P48729 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1A1P48729 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1A1P48729 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.33■□□□□ 0.53
CSNK1A1P48729 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1A1P48729 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1A1P48729 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms