Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 AL512408.1-201ENST00000569378 2000 ntBASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 AC135279.3-201ENST00000610945 1311 ntBASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA13Q9Y5I0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.14■■□□□ 1.14
PCDHA13Q9Y5I0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA13Q9Y5I0 TSPY26P-201ENST00000476365 1326 ntBASIC22.14■■□□□ 1.14
PCDHA13Q9Y5I0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHA13Q9Y5I0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 AC099791.1-201ENST00000416440 715 ntBASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHA13Q9Y5I0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 AC011484.1-201ENST00000377652 1995 ntBASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 AC112907.3-201ENST00000577781 2400 ntBASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA13Q9Y5I0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 EEF1DP3-203ENST00000566025 782 ntBASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PCDHA13Q9Y5I0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms