Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 SLC7A5P1-201ENST00000568957 537 ntBASIC19.99■□□□□ 0.79
KRT78Q8N1N4 KRT18P61-201ENST00000585825 1298 ntBASIC19.99■□□□□ 0.79
KRT78Q8N1N4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT78Q8N1N4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT78Q8N1N4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT78Q8N1N4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT78Q8N1N4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT78Q8N1N4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT78Q8N1N4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.98■□□□□ 0.79
KRT78Q8N1N4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT78Q8N1N4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT78Q8N1N4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT78Q8N1N4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.97■□□□□ 0.79
KRT78Q8N1N4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT78Q8N1N4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 KRT18P5-201ENST00000436075 1291 ntBASIC19.96■□□□□ 0.79
KRT78Q8N1N4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT78Q8N1N4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
KRT78Q8N1N4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 RARRES2P11-201ENST00000635158 484 ntBASIC19.95■□□□□ 0.78
KRT78Q8N1N4 AC121338.2-201ENST00000622535 1744 ntBASIC19.95■□□□□ 0.78
KRT78Q8N1N4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT78Q8N1N4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 KRT18P11-201ENST00000435214 1283 ntBASIC19.94■□□□□ 0.78
KRT78Q8N1N4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 UBE2DNL-204ENST00000602536 740 ntBASIC19.94■□□□□ 0.78
KRT78Q8N1N4 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.94■□□□□ 0.78
KRT78Q8N1N4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
KRT78Q8N1N4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms