Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 MRPL40YPL173W 894 nt2.13□□□□□ -2.07
RRP40Q08285 JJJ2YJL162C 1752 nt2.13□□□□□ -2.07
RRP40Q08285 YBP2YGL060W 1926 nt2.13□□□□□ -2.07
RRP40Q08285 GCV2YMR189W 3105 nt2.13□□□□□ -2.07
RRP40Q08285 YJL181WYJL181W 1836 nt2.12□□□□□ -2.07
RRP40Q08285 CLN3YAL040C 1743 nt2.12□□□□□ -2.07
RRP40Q08285 TVP15YDR100W 432 nt2.12□□□□□ -2.07
RRP40Q08285 ERG28YER044C 447 nt2.12□□□□□ -2.07
RRP40Q08285 MIG2YGL209W 1149 nt2.12□□□□□ -2.07
RRP40Q08285 COG2YGR120C 789 nt2.12□□□□□ -2.07
RRP40Q08285 YJL032WYJL032W 315 nt2.12□□□□□ -2.07
RRP40Q08285 TFB6YOR352W 1032 nt2.12□□□□□ -2.07
RRP40Q08285 ALG14YBR070C 714 nt2.12□□□□□ -2.07
RRP40Q08285 RPC40YPR110C 1008 nt2.12□□□□□ -2.07
RRP40Q08285 PIG2YIL045W 1617 nt2.12□□□□□ -2.07
RRP40Q08285 SSD1YDR293C 3753 nt2.11□□□□□ -2.07
RRP40Q08285 SAP190YKR028W 3102 nt2.11□□□□□ -2.07
RRP40Q08285 SRD1YCR018C 666 nt2.11□□□□□ -2.07
RRP40Q08285 YAL042C-AYAL042C-A 378 nt2.11□□□□□ -2.07
RRP40Q08285 FPR1YNL135C 345 nt2.11□□□□□ -2.07
RRP40Q08285 DGK1YOR311C 873 nt2.11□□□□□ -2.07
RRP40Q08285 TYE7YOR344C 876 nt2.11□□□□□ -2.07
RRP40Q08285 YLR108CYLR108C 1458 nt2.11□□□□□ -2.07
RRP40Q08285 RTG3YBL103C 1461 nt2.11□□□□□ -2.07
RRP40Q08285 SLF1YDR515W 1344 nt2.11□□□□□ -2.07
RRP40Q08285 BNI1YNL271C 5862 nt2.11□□□□□ -2.07
RRP40Q08285 GUK1YDR454C 564 nt2.1□□□□□ -2.07
RRP40Q08285 YGL117WYGL117W 798 nt2.1□□□□□ -2.07
RRP40Q08285 YGL204CYGL204C 306 nt2.1□□□□□ -2.07
RRP40Q08285 GOS1YHL031C 672 nt2.1□□□□□ -2.07
RRP40Q08285 PET191YJR034W 327 nt2.1□□□□□ -2.07
RRP40Q08285 YLR169WYLR169W 354 nt2.1□□□□□ -2.07
RRP40Q08285 YML090WYML090W 387 nt2.1□□□□□ -2.07
RRP40Q08285 YML094C-AYML094C-A 402 nt2.1□□□□□ -2.07
RRP40Q08285 YOR283WYOR283W 693 nt2.1□□□□□ -2.07
RRP40Q08285 ISU1YPL135W 498 nt2.1□□□□□ -2.07
RRP40Q08285 TRM2YKR056W 1920 nt2.1□□□□□ -2.07
RRP40Q08285 UBR2YLR024C 5619 nt2.1□□□□□ -2.07
RRP40Q08285 TFC3YAL001C 3483 nt2.1□□□□□ -2.07
RRP40Q08285 POM152YMR129W 4014 nt2.1□□□□□ -2.07
RRP40Q08285 IRC8YJL051W 2469 nt2.1□□□□□ -2.07
RRP40Q08285 APC2YLR127C 2562 nt2.09□□□□□ -2.07
RRP40Q08285 RGA1YOR127W 3024 nt2.09□□□□□ -2.07
RRP40Q08285 RPN9YDR427W 1182 nt2.09□□□□□ -2.07
RRP40Q08285 YIL012WYIL012W 342 nt2.09□□□□□ -2.07
RRP40Q08285 VPS51YKR020W 495 nt2.09□□□□□ -2.07
RRP40Q08285 YLR050CYLR050C 486 nt2.09□□□□□ -2.07
RRP40Q08285 YKE2YLR200W 345 nt2.09□□□□□ -2.07
RRP40Q08285 YMR306C-AYMR306C-A 390 nt2.09□□□□□ -2.07
RRP40Q08285 DIA1YMR316W 1011 nt2.09□□□□□ -2.07
RRP40Q08285 YPR014CYPR014C 330 nt2.09□□□□□ -2.07
RRP40Q08285 snR191snR191 274 nt2.09□□□□□ -2.07
RRP40Q08285 ART10YLR392C 1557 nt2.09□□□□□ -2.08
RRP40Q08285 NPR3YHL023C 3441 nt2.09□□□□□ -2.08
RRP40Q08285 TOR2YKL203C 7425 nt2.09□□□□□ -2.08
RRP40Q08285 AMS1YGL156W 3252 nt2.08□□□□□ -2.08
RRP40Q08285 BUD26YDR241W 288 nt2.08□□□□□ -2.08
RRP40Q08285 VAB2YEL005C 849 nt2.08□□□□□ -2.08
RRP40Q08285 RPS24AYER074W 408 nt2.08□□□□□ -2.08
RRP40Q08285 RTS3YGR161C 792 nt2.08□□□□□ -2.08
RRP40Q08285 ATP7YKL016C 525 nt2.08□□□□□ -2.08
RRP40Q08285 YKL069WYKL069W 543 nt2.08□□□□□ -2.08
RRP40Q08285 YOR097CYOR097C 528 nt2.08□□□□□ -2.08
RRP40Q08285 HUA2YOR284W 732 nt2.08□□□□□ -2.08
RRP40Q08285 HAT1YPL001W 1125 nt2.08□□□□□ -2.08
RRP40Q08285 NTC20YBR188C 423 nt2.08□□□□□ -2.08
RRP40Q08285 ESA1YOR244W 1338 nt2.08□□□□□ -2.08
RRP40Q08285 ASI3YNL008C 2031 nt2.08□□□□□ -2.08
RRP40Q08285 UBX3YDL091C 1368 nt2.08□□□□□ -2.08
RRP40Q08285 YKL075CYKL075C 1353 nt2.08□□□□□ -2.08
RRP40Q08285 MCD1YDL003W 1701 nt2.08□□□□□ -2.08
RRP40Q08285 SRB4YER022W 2064 nt2.08□□□□□ -2.08
RRP40Q08285 SDC25YLL016W 3147 nt2.08□□□□□ -2.08
RRP40Q08285 MAK11YKL021C 1407 nt2.08□□□□□ -2.08
RRP40Q08285 SPB1YCL054W 2526 nt2.08□□□□□ -2.08
RRP40Q08285 SIP3YNL257C 3690 nt2.07□□□□□ -2.08
RRP40Q08285 UTP22YGR090W 3714 nt2.07□□□□□ -2.08
RRP40Q08285 SSE1YPL106C 2082 nt2.07□□□□□ -2.08
RRP40Q08285 GIC2YDR309C 1152 nt2.07□□□□□ -2.08
RRP40Q08285 GCN4YEL009C 846 nt2.07□□□□□ -2.08
RRP40Q08285 YER046W-AYER046W-A 330 nt2.07□□□□□ -2.08
RRP40Q08285 YGR111WYGR111W 1203 nt2.07□□□□□ -2.08
RRP40Q08285 YGR270C-AYGR270C-A 219 nt2.07□□□□□ -2.08
RRP40Q08285 YKL115CYKL115C 393 nt2.07□□□□□ -2.08
RRP40Q08285 UBC12YLR306W 567 nt2.07□□□□□ -2.08
RRP40Q08285 HSC82YMR186W 2118 nt2.07□□□□□ -2.08
RRP40Q08285 HEM4YOR278W 828 nt2.07□□□□□ -2.08
RRP40Q08285 YRO2YBR054W 1035 nt2.07□□□□□ -2.08
RRP40Q08285 MAL33YBR297W 1407 nt2.07□□□□□ -2.08
RRP40Q08285 NUR1YDL089W 1455 nt2.07□□□□□ -2.08
RRP40Q08285 AFI1YOR129C 2682 nt2.06□□□□□ -2.08
RRP40Q08285 NEL1YHR035W 1893 nt2.06□□□□□ -2.08
RRP40Q08285 YCR016WYCR016W 873 nt2.06□□□□□ -2.08
RRP40Q08285 KEI1YDR367W 666 nt2.06□□□□□ -2.08
RRP40Q08285 RPL27BYDR471W 411 nt2.06□□□□□ -2.08
RRP40Q08285 TIM9YEL020W-A 264 nt2.06□□□□□ -2.08
RRP40Q08285 YMR31YFR049W 372 nt2.06□□□□□ -2.08
RRP40Q08285 YGL242CYGL242C 546 nt2.06□□□□□ -2.08
RRP40Q08285 YGR050CYGR050C 357 nt2.06□□□□□ -2.08
RRP40Q08285 GTR2YGR163W 1026 nt2.06□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 185.5 ms