RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C MTC1P47018 478 aaKnown RBP15.41■□□□□ 0.06
VAB2YEL005C FAP1P53971 965 aa15.39■□□□□ 0.05
VAB2YEL005C PRY3P47033 881 aa14.53□□□□□ -0.08
VAB2YEL005C AAD16Q02895 342 aa13.81□□□□□ -0.2
VAB2YEL005C PRI1P10363 409 aa13.74□□□□□ -0.21
VAB2YEL005C YCK3P39962 524 aa13.74□□□□□ -0.21
VAB2YEL005C HAA1Q12753 694 aaKnown RBP13.49□□□□□ -0.25
VAB2YEL005C DRS1P32892 752 aaKnown RBP13.08□□□□□ -0.32
VAB2YEL005C ISW2Q08773 1120 aa13.03□□□□□ -0.32
VAB2YEL005C RPG1P38249 964 aaKnown RBP12.98□□□□□ -0.33
VAB2YEL005C TSR3Q12094 313 aaKnown RBP12.96□□□□□ -0.33
VAB2YEL005C MRPL32P25348 183 aa12.39□□□□□ -0.43
VAB2YEL005C YGL015CP33199 130 aa12.23□□□□□ -0.45
VAB2YEL005C DIP2Q12220 943 aaPredicted RBP11.94□□□□□ -0.5
VAB2YEL005C RSE1Q04693 1361 aaKnown RBP11.89□□□□□ -0.51
VAB2YEL005C BUD31P25337 157 aaPredicted RBP11.82□□□□□ -0.52
VAB2YEL005C REB1P21538 810 aa11.68□□□□□ -0.54
VAB2YEL005C RPL17AP05740 184 aaKnown RBP11.63□□□□□ -0.55
VAB2YEL005C RPL17BP46990 184 aaKnown RBP11.63□□□□□ -0.55
VAB2YEL005C CDC27P38042 758 aa11.6□□□□□ -0.55
VAB2YEL005C MAP2P38174 421 aaKnown RBP11.38□□□□□ -0.59
VAB2YEL005C UBP10P53874 792 aaPredicted RBP11.36□□□□□ -0.59
VAB2YEL005C YKR023WP36119 530 aaKnown RBP11.24□□□□□ -0.61
VAB2YEL005C AVT3P36062 692 aa11.14□□□□□ -0.63
VAB2YEL005C SIS1P25294 352 aaKnown RBP11.12□□□□□ -0.63
VAB2YEL005C DCD1P06773 312 aa11.05□□□□□ -0.64
VAB2YEL005C SPT21P35209 758 aa11.04□□□□□ -0.64
VAB2YEL005C HOP09932 586 aa11.02□□□□□ -0.65
VAB2YEL005C TFC8Q12308 588 aa10.98□□□□□ -0.65
VAB2YEL005C UBP9P39967 754 aa10.92□□□□□ -0.66
VAB2YEL005C SCY1P53009 804 aa10.91□□□□□ -0.66
VAB2YEL005C TIF4632P39936 914 aaKnown RBP10.89□□□□□ -0.67
VAB2YEL005C TGL3P40308 642 aa10.88□□□□□ -0.67
VAB2YEL005C SLX5P32828 619 aaKnown RBP10.81□□□□□ -0.68
VAB2YEL005C BCH2P36122 765 aa10.59□□□□□ -0.71
VAB2YEL005C YBL029C-AQ3E756 94 aa10.38□□□□□ -0.75
VAB2YEL005C RIM101P33400 625 aa10.34□□□□□ -0.75
VAB2YEL005C MST1P07236 462 aa10.27□□□□□ -0.77
VAB2YEL005C EPS1P40557 701 aa10.22□□□□□ -0.77
VAB2YEL005C BFR2Q06631 534 aaKnown RBP10.22□□□□□ -0.77
VAB2YEL005C BDF1P35817 686 aa10.21□□□□□ -0.77
VAB2YEL005C VNX1P42839 908 aa10.17□□□□□ -0.78
VAB2YEL005C YOR238WQ08634 303 aa10.17□□□□□ -0.78
VAB2YEL005C SPP1Q03012 353 aa10.07□□□□□ -0.8
VAB2YEL005C AIR2Q12476 344 aaKnown RBP10.02□□□□□ -0.81
VAB2YEL005C WSC3Q12215 556 aa10□□□□□ -0.81
VAB2YEL005C NSR1P27476 414 aaKnown RBP RIP-Chip data9.98□□□□□ -0.81not detected
VAB2YEL005C OXP1P28273 1286 aa9.98□□□□□ -0.81
VAB2YEL005C FKH1P40466 484 aa9.94□□□□□ -0.82
VAB2YEL005C YJL171CP46992 396 aa9.94□□□□□ -0.82
VAB2YEL005C YAP5P40574 245 aa9.91□□□□□ -0.82
VAB2YEL005C TIF11P38912 153 aaKnown RBP9.87□□□□□ -0.83
VAB2YEL005C PTP3P40048 928 aa9.86□□□□□ -0.83
VAB2YEL005C YIL055CP40523 627 aaKnown RBP9.78□□□□□ -0.84
VAB2YEL005C BBC1P47068 1157 aa9.75□□□□□ -0.85
VAB2YEL005C LDB19Q12502 818 aa9.75□□□□□ -0.85
VAB2YEL005C GTT3P39996 337 aa9.74□□□□□ -0.85
VAB2YEL005C BMT6Q12291 365 aa9.71□□□□□ -0.86
VAB2YEL005C AI2P03876 854 aa9.7□□□□□ -0.86
VAB2YEL005C ULI1P43604 169 aa9.67□□□□□ -0.86
VAB2YEL005C IOC2Q12072 812 aa9.67□□□□□ -0.86
VAB2YEL005C RSM7P47150 247 aa9.66□□□□□ -0.86
VAB2YEL005C PIB1Q06651 286 aa9.59□□□□□ -0.87
VAB2YEL005C YAH1Q12184 172 aaKnown RBP9.51□□□□□ -0.89
VAB2YEL005C RTG1P32607 177 aa9.45□□□□□ -0.9
VAB2YEL005C MSB4Q12317 492 aa9.42□□□□□ -0.9
VAB2YEL005C EAP1P36041 632 aaKnown RBP9.4□□□□□ -0.9
VAB2YEL005C NCR1Q12200 1170 aa9.4□□□□□ -0.9
VAB2YEL005C TRP5P00931 707 aaKnown RBP9.38□□□□□ -0.91
VAB2YEL005C SET4P42948 560 aa9.38□□□□□ -0.91
VAB2YEL005C YOL036WQ08206 761 aa9.35□□□□□ -0.91
VAB2YEL005C MRM1P25270 412 aa9.29□□□□□ -0.92
VAB2YEL005C PSD2P53037 1138 aaKnown RBP9.29□□□□□ -0.92
VAB2YEL005C YNL035CP53962 389 aaKnown RBP9.29□□□□□ -0.92
VAB2YEL005C YLR271WQ06152 274 aa9.29□□□□□ -0.92
VAB2YEL005C SEC61P32915 480 aa9.28□□□□□ -0.92
VAB2YEL005C BCK2P33306 851 aa9.21□□□□□ -0.94
VAB2YEL005C SAP30P38429 201 aa9.18□□□□□ -0.94
VAB2YEL005C DBP1P24784 617 aaKnown RBP9.15□□□□□ -0.94
VAB2YEL005C TFG1P41895 735 aaPredicted RBP9.14□□□□□ -0.95
VAB2YEL005C YFR006WP43590 535 aa9.14□□□□□ -0.95
VAB2YEL005C VMA1P17255 1071 aaKnown RBP9.13□□□□□ -0.95
VAB2YEL005C YMR1P47147 688 aaKnown RBP RIP-Chip data9.12□□□□□ -0.95not detected
VAB2YEL005C VPS29P38759 282 aa9.1□□□□□ -0.95
VAB2YEL005C DAN4P47179 1161 aa9.1□□□□□ -0.95
VAB2YEL005C CHL1P22516 861 aaPredicted RBP9.09□□□□□ -0.95
VAB2YEL005C SAM3Q08986 587 aa9.09□□□□□ -0.95
VAB2YEL005C STS1P38637 319 aa9.06□□□□□ -0.96
VAB2YEL005C YDL129WQ07555 291 aa9.05□□□□□ -0.96
VAB2YEL005C PRE3P38624 215 aa9.03□□□□□ -0.96
VAB2YEL005C JIP4Q03361 876 aa9.01□□□□□ -0.97
VAB2YEL005C RTG3P38165 486 aa8.96□□□□□ -0.98
VAB2YEL005C GYP5Q12344 894 aa8.92□□□□□ -0.98
VAB2YEL005C XDJ1P39102 459 aa8.91□□□□□ -0.98
VAB2YEL005C CST9Q06032 482 aa8.91□□□□□ -0.98
VAB2YEL005C VRP1P37370 817 aa8.9□□□□□ -0.98
VAB2YEL005C YDR344CQ05510 147 aa8.9□□□□□ -0.98
VAB2YEL005C HTA1P04911 132 aaKnown RBP8.89□□□□□ -0.99
VAB2YEL005C HTA2P04912 132 aa8.89□□□□□ -0.99
VAB2YEL005C DCW1P36091 449 aa8.89□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 131.2 ms