RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS51, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS51YKR020W MTC1P47018 478 aaKnown RBP13.49□□□□□ -0.25
VPS51YKR020W FAP1P53971 965 aa13.24□□□□□ -0.29
VPS51YKR020W PRY3P47033 881 aa12.48□□□□□ -0.41
VPS51YKR020W AAD16Q02895 342 aa11.94□□□□□ -0.5
VPS51YKR020W PRI1P10363 409 aa11.9□□□□□ -0.5
VPS51YKR020W YCK3P39962 524 aa11.73□□□□□ -0.53
VPS51YKR020W DRS1P32892 752 aaKnown RBP11.72□□□□□ -0.53
VPS51YKR020W HAA1Q12753 694 aaKnown RBP11.6□□□□□ -0.55
VPS51YKR020W ISW2Q08773 1120 aa11.39□□□□□ -0.59
VPS51YKR020W RPG1P38249 964 aaKnown RBP11.33□□□□□ -0.6
VPS51YKR020W TSR3Q12094 313 aaKnown RBP11.24□□□□□ -0.61
VPS51YKR020W MRPL32P25348 183 aa10.77□□□□□ -0.69
VPS51YKR020W DIP2Q12220 943 aaPredicted RBP10.6□□□□□ -0.71
VPS51YKR020W YGL015CP33199 130 aa10.56□□□□□ -0.72
VPS51YKR020W RSE1Q04693 1361 aaKnown RBP10.49□□□□□ -0.73
VPS51YKR020W REB1P21538 810 aa10.28□□□□□ -0.76
VPS51YKR020W RPL17AP05740 184 aaKnown RBP10.24□□□□□ -0.77
VPS51YKR020W RPL17BP46990 184 aaKnown RBP10.24□□□□□ -0.77
VPS51YKR020W BUD31P25337 157 aaPredicted RBP10.09□□□□□ -0.79
VPS51YKR020W CDC27P38042 758 aa10.08□□□□□ -0.8
VPS51YKR020W AVT3P36062 692 aa9.93□□□□□ -0.82
VPS51YKR020W MAP2P38174 421 aaKnown RBP9.88□□□□□ -0.83
VPS51YKR020W UBP10P53874 792 aaPredicted RBP9.86□□□□□ -0.83
VPS51YKR020W YKR023WP36119 530 aaKnown RBP9.83□□□□□ -0.84
VPS51YKR020W BFR2Q06631 534 aaKnown RBP9.75□□□□□ -0.85
VPS51YKR020W SPT21P35209 758 aa9.7□□□□□ -0.86
VPS51YKR020W DCD1P06773 312 aa9.66□□□□□ -0.86
VPS51YKR020W HOP09932 586 aa9.66□□□□□ -0.86
VPS51YKR020W TFC8Q12308 588 aa9.62□□□□□ -0.87
VPS51YKR020W SIS1P25294 352 aaKnown RBP9.55□□□□□ -0.88
VPS51YKR020W SCY1P53009 804 aa9.52□□□□□ -0.89
VPS51YKR020W TIF4632P39936 914 aaKnown RBP9.48□□□□□ -0.89
VPS51YKR020W UBP9P39967 754 aa9.44□□□□□ -0.9
VPS51YKR020W TGL3P40308 642 aa9.44□□□□□ -0.9
VPS51YKR020W SLX5P32828 619 aaKnown RBP9.42□□□□□ -0.9
VPS51YKR020W BCH2P36122 765 aa9.28□□□□□ -0.92
VPS51YKR020W RIM101P33400 625 aa9.15□□□□□ -0.94
VPS51YKR020W YBL029C-AQ3E756 94 aa8.99□□□□□ -0.97
VPS51YKR020W EPS1P40557 701 aa8.98□□□□□ -0.97
VPS51YKR020W BDF1P35817 686 aa8.96□□□□□ -0.98
VPS51YKR020W MST1P07236 462 aa8.93□□□□□ -0.98
VPS51YKR020W YOR238WQ08634 303 aa8.88□□□□□ -0.99
VPS51YKR020W OXP1P28273 1286 aa8.84□□□□□ -0.99
VPS51YKR020W VNX1P42839 908 aa8.82□□□□□ -1
VPS51YKR020W TFA1P36100 482 aa8.79□□□□□ -1
VPS51YKR020W PTP3P40048 928 aa8.76□□□□□ -1.01
VPS51YKR020W SPP1Q03012 353 aa8.75□□□□□ -1.01
VPS51YKR020W WSC3Q12215 556 aa8.73□□□□□ -1.01
VPS51YKR020W NSR1P27476 414 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01 RIP-Chip
VPS51YKR020W YIL055CP40523 627 aaKnown RBP8.71□□□□□ -1.02
VPS51YKR020W YAP5P40574 245 aa8.68□□□□□ -1.02
VPS51YKR020W AIR2Q12476 344 aaKnown RBP8.65□□□□□ -1.02
VPS51YKR020W BBC1P47068 1157 aa8.64□□□□□ -1.03
VPS51YKR020W YJL171CP46992 396 aa8.63□□□□□ -1.03
VPS51YKR020W TIF11P38912 153 aaKnown RBP8.59□□□□□ -1.03
VPS51YKR020W FKH1P40466 484 aa8.59□□□□□ -1.03
VPS51YKR020W AI2P03876 854 aa8.58□□□□□ -1.04
VPS51YKR020W RSM7P47150 247 aa8.58□□□□□ -1.04
VPS51YKR020W GTT3P39996 337 aa8.54□□□□□ -1.04
VPS51YKR020W YAH1Q12184 172 aaKnown RBP8.49□□□□□ -1.05
VPS51YKR020W LDB19Q12502 818 aa8.49□□□□□ -1.05
VPS51YKR020W ULI1P43604 169 aa8.45□□□□□ -1.06
VPS51YKR020W PIB1Q06651 286 aa8.43□□□□□ -1.06
VPS51YKR020W BMT6Q12291 365 aa8.43□□□□□ -1.06
VPS51YKR020W IOC2Q12072 812 aa8.42□□□□□ -1.06
VPS51YKR020W YLR271WQ06152 274 aa8.28□□□□□ -1.08
VPS51YKR020W MSB4Q12317 492 aa8.26□□□□□ -1.09
VPS51YKR020W RTG1P32607 177 aa8.25□□□□□ -1.09
VPS51YKR020W MRM1P25270 412 aa8.24□□□□□ -1.09
VPS51YKR020W EAP1P36041 632 aaKnown RBP8.24□□□□□ -1.09
VPS51YKR020W PSD2P53037 1138 aaKnown RBP8.24□□□□□ -1.09
VPS51YKR020W SET4P42948 560 aa8.22□□□□□ -1.09
VPS51YKR020W TRP5P00931 707 aaKnown RBP8.21□□□□□ -1.1
VPS51YKR020W NCR1Q12200 1170 aa8.21□□□□□ -1.1
VPS51YKR020W YOL036WQ08206 761 aa8.2□□□□□ -1.1
VPS51YKR020W YNL035CP53962 389 aaKnown RBP8.13□□□□□ -1.11
VPS51YKR020W SEC61P32915 480 aa8.11□□□□□ -1.11
VPS51YKR020W DBP1P24784 617 aaKnown RBP8.09□□□□□ -1.11
VPS51YKR020W YFR006WP43590 535 aa8.08□□□□□ -1.12
VPS51YKR020W YMR1P47147 688 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
VPS51YKR020W VPS29P38759 282 aa8.05□□□□□ -1.12
VPS51YKR020W VMA1P17255 1071 aaKnown RBP8.04□□□□□ -1.12
VPS51YKR020W TFG1P41895 735 aaPredicted RBP8.03□□□□□ -1.12
VPS51YKR020W SAP30P38429 201 aa8.02□□□□□ -1.13
VPS51YKR020W STS1P38637 319 aa8.01□□□□□ -1.13
VPS51YKR020W BCK2P33306 851 aa7.99□□□□□ -1.13
VPS51YKR020W SAM3Q08986 587 aa7.99□□□□□ -1.13
VPS51YKR020W RTG3P38165 486 aa7.97□□□□□ -1.13
VPS51YKR020W DAN4P47179 1161 aa7.96□□□□□ -1.14
VPS51YKR020W CST9Q06032 482 aa7.95□□□□□ -1.14
VPS51YKR020W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
VPS51YKR020W SSP1P38871 571 aa7.93□□□□□ -1.14
VPS51YKR020W CHL1P22516 861 aaPredicted RBP7.92□□□□□ -1.14
VPS51YKR020W JIP4Q03361 876 aa7.92□□□□□ -1.14
VPS51YKR020W YDL129WQ07555 291 aa7.92□□□□□ -1.14
VPS51YKR020W PRE3P38624 215 aa7.88□□□□□ -1.15
VPS51YKR020W GYP5Q12344 894 aa7.88□□□□□ -1.15
VPS51YKR020W RCR1P38212 213 aa7.86□□□□□ -1.15
VPS51YKR020W DCW1P36091 449 aa7.85□□□□□ -1.15
VPS51YKR020W HTA1P04911 132 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms