RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W MTC1P47018 478 aaKnown RBP17.98■□□□□ 0.47
RPN9YDR427W FAP1P53971 965 aa16.9■□□□□ 0.3
RPN9YDR427W DRS1P32892 752 aaKnown RBP16.19■□□□□ 0.18
RPN9YDR427W PRY3P47033 881 aa15.87■□□□□ 0.13
RPN9YDR427W PRI1P10363 409 aa15.49■□□□□ 0.07
RPN9YDR427W AAD16Q02895 342 aa15.49■□□□□ 0.07
RPN9YDR427W ISW2Q08773 1120 aa15.1■□□□□ 0.01
RPN9YDR427W HAA1Q12753 694 aaKnown RBP14.9□□□□□ -0.02
RPN9YDR427W RPG1P38249 964 aaKnown RBP14.89□□□□□ -0.03
RPN9YDR427W YCK3P39962 524 aa14.83□□□□□ -0.04
RPN9YDR427W TSR3Q12094 313 aaKnown RBP14.58□□□□□ -0.08
RPN9YDR427W DIP2Q12220 943 aaPredicted RBP14.41□□□□□ -0.1
RPN9YDR427W RSE1Q04693 1361 aaKnown RBP14.13□□□□□ -0.15
RPN9YDR427W MRPL32P25348 183 aa14.1□□□□□ -0.15
RPN9YDR427W REB1P21538 810 aa13.75□□□□□ -0.21
RPN9YDR427W YGL015CP33199 130 aa13.7□□□□□ -0.22
RPN9YDR427W RPL17AP05740 184 aaKnown RBP13.69□□□□□ -0.22
RPN9YDR427W AVT3P36062 692 aa13.69□□□□□ -0.22
RPN9YDR427W RPL17BP46990 184 aaKnown RBP13.69□□□□□ -0.22
RPN9YDR427W BFR2Q06631 534 aaKnown RBP13.19□□□□□ -0.3
RPN9YDR427W CDC27P38042 758 aa13.17□□□□□ -0.3
RPN9YDR427W SPT21P35209 758 aa13.01□□□□□ -0.33
RPN9YDR427W YKR023WP36119 530 aaKnown RBP13□□□□□ -0.33
RPN9YDR427W UBP10P53874 792 aaPredicted RBP12.99□□□□□ -0.33
RPN9YDR427W MAP2P38174 421 aaKnown RBP12.87□□□□□ -0.35
RPN9YDR427W BUD31P25337 157 aaPredicted RBP12.78□□□□□ -0.36
RPN9YDR427W TFC8Q12308 588 aa12.77□□□□□ -0.37
RPN9YDR427W HOP09932 586 aa12.75□□□□□ -0.37
RPN9YDR427W DCD1P06773 312 aa12.68□□□□□ -0.38
RPN9YDR427W SCY1P53009 804 aa12.52□□□□□ -0.41
RPN9YDR427W TIF4632P39936 914 aaKnown RBP12.51□□□□□ -0.41
RPN9YDR427W RIM101P33400 625 aa12.46□□□□□ -0.41
RPN9YDR427W SLX5P32828 619 aaKnown RBP12.45□□□□□ -0.42
RPN9YDR427W TGL3P40308 642 aa12.41□□□□□ -0.42
RPN9YDR427W BCH2P36122 765 aa12.31□□□□□ -0.44
RPN9YDR427W UBP9P39967 754 aa12.28□□□□□ -0.44
RPN9YDR427W SIS1P25294 352 aaKnown RBP12.14□□□□□ -0.47
RPN9YDR427W EPS1P40557 701 aa11.99□□□□□ -0.49
RPN9YDR427W OXP1P28273 1286 aa11.96□□□□□ -0.49
RPN9YDR427W BDF1P35817 686 aa11.95□□□□□ -0.5
RPN9YDR427W YIL055CP40523 627 aaKnown RBP11.92□□□□□ -0.5
RPN9YDR427W PTP3P40048 928 aa11.91□□□□□ -0.5
RPN9YDR427W MST1P07236 462 aa11.78□□□□□ -0.52
RPN9YDR427W YOR238WQ08634 303 aa11.77□□□□□ -0.53
RPN9YDR427W BBC1P47068 1157 aa11.75□□□□□ -0.53
RPN9YDR427W NSR1P27476 414 aaKnown RBP RIP-Chip data11.69□□□□□ -0.54not detected
RPN9YDR427W RSM7P47150 247 aa11.69□□□□□ -0.54
RPN9YDR427W YBL029C-AQ3E756 94 aa11.68□□□□□ -0.54
RPN9YDR427W AI2P03876 854 aa11.63□□□□□ -0.55
RPN9YDR427W YAP5P40574 245 aa11.6□□□□□ -0.55
RPN9YDR427W YAH1Q12184 172 aaKnown RBP11.59□□□□□ -0.55
RPN9YDR427W VNX1P42839 908 aa11.55□□□□□ -0.56
RPN9YDR427W TFA1P36100 482 aa11.49□□□□□ -0.57
RPN9YDR427W SPP1Q03012 353 aa11.48□□□□□ -0.57
RPN9YDR427W WSC3Q12215 556 aa11.44□□□□□ -0.58
RPN9YDR427W GTT3P39996 337 aa11.4□□□□□ -0.58
RPN9YDR427W YLR271WQ06152 274 aa11.34□□□□□ -0.59
RPN9YDR427W TIF11P38912 153 aaKnown RBP11.33□□□□□ -0.6
RPN9YDR427W YJL171CP46992 396 aa11.26□□□□□ -0.61
RPN9YDR427W PSD2P53037 1138 aaKnown RBP11.25□□□□□ -0.61
RPN9YDR427W AIR2Q12476 344 aaKnown RBP11.23□□□□□ -0.61
RPN9YDR427W FKH1P40466 484 aa11.22□□□□□ -0.61
RPN9YDR427W MRM1P25270 412 aa11.17□□□□□ -0.62
RPN9YDR427W PIB1Q06651 286 aa11.17□□□□□ -0.62
RPN9YDR427W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.16□□□□□ -0.62not detected
RPN9YDR427W ULI1P43604 169 aa11.15□□□□□ -0.62
RPN9YDR427W LDB19Q12502 818 aa11.15□□□□□ -0.62
RPN9YDR427W SSP1P38871 571 aa11.1□□□□□ -0.63
RPN9YDR427W IOC2Q12072 812 aa11.09□□□□□ -0.63
RPN9YDR427W MSB4Q12317 492 aa11.09□□□□□ -0.63
RPN9YDR427W EAP1P36041 632 aaKnown RBP11.06□□□□□ -0.64
RPN9YDR427W BMT6Q12291 365 aa11.04□□□□□ -0.64
RPN9YDR427W YMR1P47147 688 aaKnown RBP RIP-Chip data10.99□□□□□ -0.65not detected
RPN9YDR427W YOL036WQ08206 761 aa10.95□□□□□ -0.66
RPN9YDR427W RTG3P38165 486 aa10.94□□□□□ -0.66
RPN9YDR427W SET4P42948 560 aa10.94□□□□□ -0.66
RPN9YDR427W DBP1P24784 617 aaKnown RBP10.93□□□□□ -0.66
RPN9YDR427W VPS29P38759 282 aa10.91□□□□□ -0.66
RPN9YDR427W MGA2P40578 1113 aa10.91□□□□□ -0.66
RPN9YDR427W RTG1P32607 177 aa10.9□□□□□ -0.66
RPN9YDR427W CST9Q06032 482 aa10.9□□□□□ -0.66
RPN9YDR427W TRP5P00931 707 aaKnown RBP10.89□□□□□ -0.67
RPN9YDR427W YFR006WP43590 535 aa10.86□□□□□ -0.67
RPN9YDR427W NCR1Q12200 1170 aa10.86□□□□□ -0.67
RPN9YDR427W VMA1P17255 1071 aaKnown RBP10.85□□□□□ -0.67
RPN9YDR427W YNL035CP53962 389 aaKnown RBP10.84□□□□□ -0.67
RPN9YDR427W SEC61P32915 480 aa10.83□□□□□ -0.68
RPN9YDR427W SAM3Q08986 587 aa10.81□□□□□ -0.68
RPN9YDR427W STS1P38637 319 aa10.8□□□□□ -0.68
RPN9YDR427W TFG1P41895 735 aaPredicted RBP10.76□□□□□ -0.69
RPN9YDR427W ABP1P15891 592 aaKnown RBP10.72□□□□□ -0.69
RPN9YDR427W JIP4Q03361 876 aa10.68□□□□□ -0.7
RPN9YDR427W RCR1P38212 213 aa10.67□□□□□ -0.7
RPN9YDR427W GYP5Q12344 894 aa10.65□□□□□ -0.7
RPN9YDR427W HTA1P04911 132 aaKnown RBP10.62□□□□□ -0.71
RPN9YDR427W HTA2P04912 132 aa10.62□□□□□ -0.71
RPN9YDR427W DAN4P47179 1161 aa10.61□□□□□ -0.71
RPN9YDR427W SAP30P38429 201 aa10.6□□□□□ -0.71
RPN9YDR427W YDL129WQ07555 291 aa10.58□□□□□ -0.72
RPN9YDR427W DCW1P36091 449 aa10.56□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms