RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W FAP1P53971 965 aa9.69□□□□□ -0.86
TRM2YKR056W MTC1P47018 478 aaKnown RBP9.48□□□□□ -0.89
TRM2YKR056W PRY3P47033 881 aa9.14□□□□□ -0.95
TRM2YKR056W AAD16Q02895 342 aa8.64□□□□□ -1.03
TRM2YKR056W PRI1P10363 409 aa8.54□□□□□ -1.04
TRM2YKR056W YCK3P39962 524 aa8.52□□□□□ -1.05
TRM2YKR056W HAA1Q12753 694 aaKnown RBP8.5□□□□□ -1.05
TRM2YKR056W ISW2Q08773 1120 aa8.1□□□□□ -1.11
TRM2YKR056W RPG1P38249 964 aaKnown RBP8.04□□□□□ -1.12
TRM2YKR056W TSR3Q12094 313 aaKnown RBP8.04□□□□□ -1.12
TRM2YKR056W DRS1P32892 752 aaKnown RBP7.9□□□□□ -1.14
TRM2YKR056W MRPL32P25348 183 aa7.75□□□□□ -1.17
TRM2YKR056W YGL015CP33199 130 aa7.7□□□□□ -1.18
TRM2YKR056W BUD31P25337 157 aaPredicted RBP7.46□□□□□ -1.21
TRM2YKR056W RSE1Q04693 1361 aaKnown RBP7.32□□□□□ -1.24
TRM2YKR056W DIP2Q12220 943 aaPredicted RBP7.28□□□□□ -1.24
TRM2YKR056W REB1P21538 810 aa7.23□□□□□ -1.25
TRM2YKR056W RPL17AP05740 184 aaKnown RBP7.15□□□□□ -1.26
TRM2YKR056W RPL17BP46990 184 aaKnown RBP7.15□□□□□ -1.26
TRM2YKR056W CDC27P38042 758 aa7.15□□□□□ -1.27
TRM2YKR056W UBP10P53874 792 aaPredicted RBP7.07□□□□□ -1.28
TRM2YKR056W SIS1P25294 352 aaKnown RBP7.05□□□□□ -1.28
TRM2YKR056W MAP2P38174 421 aaKnown RBP7.05□□□□□ -1.28
TRM2YKR056W UBP9P39967 754 aa6.91□□□□□ -1.3
TRM2YKR056W YKR023WP36119 530 aaKnown RBP6.89□□□□□ -1.31
TRM2YKR056W TIF4632P39936 914 aaKnown RBP6.83□□□□□ -1.32
TRM2YKR056W TGL3P40308 642 aa6.8□□□□□ -1.32
TRM2YKR056W HOP09932 586 aa6.78□□□□□ -1.32
TRM2YKR056W DCD1P06773 312 aa6.77□□□□□ -1.33
TRM2YKR056W SCY1P53009 804 aa6.75□□□□□ -1.33
TRM2YKR056W TFC8Q12308 588 aa6.75□□□□□ -1.33
TRM2YKR056W SPT21P35209 758 aa6.72□□□□□ -1.33
TRM2YKR056W SLX5P32828 619 aaKnown RBP6.72□□□□□ -1.33
TRM2YKR056W AVT3P36062 692 aa6.71□□□□□ -1.34
TRM2YKR056W BCH2P36122 765 aa6.49□□□□□ -1.37
TRM2YKR056W YBL029C-AQ3E756 94 aa6.45□□□□□ -1.38
TRM2YKR056W MST1P07236 462 aa6.37□□□□□ -1.39
TRM2YKR056W YOR238WQ08634 303 aa6.33□□□□□ -1.4
TRM2YKR056W VNX1P42839 908 aa6.33□□□□□ -1.4
TRM2YKR056W SPP1Q03012 353 aa6.29□□□□□ -1.4
TRM2YKR056W RIM101P33400 625 aa6.29□□□□□ -1.4
TRM2YKR056W YJL171CP46992 396 aa6.29□□□□□ -1.4
TRM2YKR056W EPS1P40557 701 aa6.27□□□□□ -1.41
TRM2YKR056W BDF1P35817 686 aa6.27□□□□□ -1.41
TRM2YKR056W AIR2Q12476 344 aaKnown RBP6.24□□□□□ -1.41
TRM2YKR056W WSC3Q12215 556 aa6.23□□□□□ -1.41
TRM2YKR056W FKH1P40466 484 aa6.19□□□□□ -1.42
TRM2YKR056W NSR1P27476 414 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
TRM2YKR056W TIF11P38912 153 aaKnown RBP6.15□□□□□ -1.43
TRM2YKR056W YAP5P40574 245 aa6.15□□□□□ -1.43
TRM2YKR056W BFR2Q06631 534 aaKnown RBP6.11□□□□□ -1.43
TRM2YKR056W BMT6Q12291 365 aa6.1□□□□□ -1.43
TRM2YKR056W GTT3P39996 337 aa6.07□□□□□ -1.44
TRM2YKR056W LDB19Q12502 818 aa6.07□□□□□ -1.44
TRM2YKR056W OXP1P28273 1286 aa6.04□□□□□ -1.44
TRM2YKR056W PTP3P40048 928 aa6.04□□□□□ -1.44
TRM2YKR056W ULI1P43604 169 aa6.02□□□□□ -1.45
TRM2YKR056W BBC1P47068 1157 aa6.01□□□□□ -1.45
TRM2YKR056W YIL055CP40523 627 aaKnown RBP6.01□□□□□ -1.45
TRM2YKR056W IOC2Q12072 812 aa5.99□□□□□ -1.45
TRM2YKR056W AI2P03876 854 aa5.92□□□□□ -1.46
TRM2YKR056W TFA1P36100 482 aa5.91□□□□□ -1.46
TRM2YKR056W RSM7P47150 247 aa5.89□□□□□ -1.47
TRM2YKR056W PIB1Q06651 286 aa5.88□□□□□ -1.47
TRM2YKR056W RTG1P32607 177 aa5.87□□□□□ -1.47
TRM2YKR056W EAP1P36041 632 aaKnown RBP5.86□□□□□ -1.47
TRM2YKR056W NCR1Q12200 1170 aa5.86□□□□□ -1.47
TRM2YKR056W MSB4Q12317 492 aa5.85□□□□□ -1.47
TRM2YKR056W TRP5P00931 707 aaKnown RBP5.8□□□□□ -1.48
TRM2YKR056W SET4P42948 560 aa5.78□□□□□ -1.48
TRM2YKR056W YNL035CP53962 389 aaKnown RBP5.78□□□□□ -1.48
TRM2YKR056W SEC61P32915 480 aa5.77□□□□□ -1.49
TRM2YKR056W BCK2P33306 851 aa5.77□□□□□ -1.49
TRM2YKR056W YAH1Q12184 172 aaKnown RBP5.77□□□□□ -1.49
TRM2YKR056W YOL036WQ08206 761 aa5.76□□□□□ -1.49
TRM2YKR056W TFG1P41895 735 aaPredicted RBP5.74□□□□□ -1.49
TRM2YKR056W SAP30P38429 201 aa5.7□□□□□ -1.5
TRM2YKR056W CHL1P22516 861 aaPredicted RBP5.67□□□□□ -1.5
TRM2YKR056W MRM1P25270 412 aa5.66□□□□□ -1.5
TRM2YKR056W PRE3P38624 215 aa5.62□□□□□ -1.51
TRM2YKR056W PSD2P53037 1138 aaKnown RBP5.62□□□□□ -1.51
TRM2YKR056W YDL129WQ07555 291 aa5.61□□□□□ -1.51
TRM2YKR056W YMR1P47147 688 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
TRM2YKR056W DBP1P24784 617 aaKnown RBP5.6□□□□□ -1.51
TRM2YKR056W DAN4P47179 1161 aa5.6□□□□□ -1.51
TRM2YKR056W YLR271WQ06152 274 aa5.6□□□□□ -1.51
TRM2YKR056W RGA2Q06407 1009 aa5.6□□□□□ -1.51
TRM2YKR056W VMA1P17255 1071 aaKnown RBP5.59□□□□□ -1.51
TRM2YKR056W JIP4Q03361 876 aa5.59□□□□□ -1.51
TRM2YKR056W YFR006WP43590 535 aa5.58□□□□□ -1.52
TRM2YKR056W SAM3Q08986 587 aa5.58□□□□□ -1.52
TRM2YKR056W XDJ1P39102 459 aa5.57□□□□□ -1.52
TRM2YKR056W VRP1P37370 817 aa5.55□□□□□ -1.52
TRM2YKR056W VPS29P38759 282 aa5.52□□□□□ -1.53
TRM2YKR056W DPS1P04802 557 aaKnown RBP5.51□□□□□ -1.53
TRM2YKR056W ABP1P15891 592 aaKnown RBP5.5□□□□□ -1.53
TRM2YKR056W STS1P38637 319 aa5.5□□□□□ -1.53
TRM2YKR056W GYP5Q12344 894 aa5.49□□□□□ -1.53
TRM2YKR056W HTA1P04911 132 aaKnown RBP5.48□□□□□ -1.53
TRM2YKR056W HTA2P04912 132 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms