Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 LST4YKL176C 2487 nt3.36□□□□□ -1.87
VPS4P52917 YAT2YER024W 2772 nt3.36□□□□□ -1.87
VPS4P52917 AVT5YBL089W 1380 nt3.36□□□□□ -1.87
VPS4P52917 SMC2YFR031C 3513 nt3.35□□□□□ -1.87
VPS4P52917 UBP14YBR058C 2346 nt3.35□□□□□ -1.87
VPS4P52917 PBP4YDL053C 558 nt3.35□□□□□ -1.87
VPS4P52917 OCA6YDR067C 675 nt3.35□□□□□ -1.87
VPS4P52917 RTT105YER104W 627 nt3.35□□□□□ -1.87
VPS4P52917 EMC4YGL231C 573 nt3.35□□□□□ -1.87
VPS4P52917 YIL046W-AYIL046W-A 165 nt3.35□□□□□ -1.87
VPS4P52917 tW(CCA)G1tW(CCA)G1 72 nt3.35□□□□□ -1.87
VPS4P52917 tW(CCA)G2tW(CCA)G2 72 nt3.35□□□□□ -1.87
VPS4P52917 tW(CCA)JtW(CCA)J 72 nt3.35□□□□□ -1.87
VPS4P52917 tW(CCA)KtW(CCA)K 72 nt3.35□□□□□ -1.87
VPS4P52917 tW(CCA)MtW(CCA)M 72 nt3.35□□□□□ -1.87
VPS4P52917 tW(CCA)PtW(CCA)P 72 nt3.35□□□□□ -1.87
VPS4P52917 YET1YKL065C 621 nt3.35□□□□□ -1.87
VPS4P52917 IRC21YMR073C 606 nt3.35□□□□□ -1.87
VPS4P52917 MIX23YBL107C 591 nt3.35□□□□□ -1.87
VPS4P52917 RPL20BYOR312C 519 nt3.35□□□□□ -1.87
VPS4P52917 YPR203WYPR203W 309 nt3.35□□□□□ -1.87
VPS4P52917 CHS3YBR023C 3498 nt3.35□□□□□ -1.87
VPS4P52917 UBX3YDL091C 1368 nt3.35□□□□□ -1.87
VPS4P52917 NSA1YGL111W 1392 nt3.35□□□□□ -1.87
VPS4P52917 SLK19YOR195W 2466 nt3.34□□□□□ -1.87
VPS4P52917 GUP1YGL084C 1683 nt3.34□□□□□ -1.87
VPS4P52917 FLO11YIR019C 4104 nt3.34□□□□□ -1.87
VPS4P52917 YDR262WYDR262W 819 nt3.34□□□□□ -1.87
VPS4P52917 YDR461C-AYDR461C-A 243 nt3.34□□□□□ -1.87
VPS4P52917 ERP6YGL002W 651 nt3.34□□□□□ -1.87
VPS4P52917 VEL1YGL258W 621 nt3.34□□□□□ -1.87
VPS4P52917 COG2YGR120C 789 nt3.34□□□□□ -1.87
VPS4P52917 YIL175WYIL175W 318 nt3.34□□□□□ -1.87
VPS4P52917 YJL222W-BYJL222W-B 138 nt3.34□□□□□ -1.87
VPS4P52917 ECI1YLR284C 843 nt3.34□□□□□ -1.87
VPS4P52917 DYN3YMR299C 939 nt3.34□□□□□ -1.87
VPS4P52917 RSM19YNR037C 276 nt3.34□□□□□ -1.87
VPS4P52917 YPL068CYPL068C 882 nt3.34□□□□□ -1.87
VPS4P52917 snR43snR43 209 nt3.34□□□□□ -1.87
VPS4P52917 MUS81YDR386W 1899 nt3.33□□□□□ -1.88
VPS4P52917 snR5snR5 204 nt3.33□□□□□ -1.88
VPS4P52917 TMA20YER007C-A 546 nt3.33□□□□□ -1.88
VPS4P52917 MVB12YGR206W 306 nt3.33□□□□□ -1.88
VPS4P52917 SFT1YKL006C-A 294 nt3.33□□□□□ -1.88
VPS4P52917 YMR254CYMR254C 309 nt3.33□□□□□ -1.88
VPS4P52917 CUR1YPR158W 759 nt3.33□□□□□ -1.88
VPS4P52917 ICR1ICR1 3199 nt3.33□□□□□ -1.88
VPS4P52917 VBA4YDR119W 2307 nt3.33□□□□□ -1.88
VPS4P52917 BRE5YNR051C 1548 nt3.33□□□□□ -1.88
VPS4P52917 NMD2YHR077C 3270 nt3.32□□□□□ -1.88
VPS4P52917 YCR045W-AYCR045W-A 351 nt3.32□□□□□ -1.88
VPS4P52917 YDL163WYDL163W 303 nt3.32□□□□□ -1.88
VPS4P52917 NTF2YER009W 378 nt3.32□□□□□ -1.88
VPS4P52917 YFR054CYFR054C 579 nt3.32□□□□□ -1.88
VPS4P52917 YMR294W-AYMR294W-A 360 nt3.32□□□□□ -1.88
VPS4P52917 HHF2YNL030W 312 nt3.32□□□□□ -1.88
VPS4P52917 MFB1YDR219C 1398 nt3.32□□□□□ -1.88
VPS4P52917 YKL075CYKL075C 1353 nt3.32□□□□□ -1.88
VPS4P52917 YDR061WYDR061W 1620 nt3.32□□□□□ -1.88
VPS4P52917 UBP8YMR223W 1416 nt3.31□□□□□ -1.88
VPS4P52917 NOP12YOL041C 1380 nt3.31□□□□□ -1.88
VPS4P52917 CPR5YDR304C 678 nt3.31□□□□□ -1.88
VPS4P52917 YGR109W-AYGR109W-A 873 nt3.31□□□□□ -1.88
VPS4P52917 YIL082WYIL082W 873 nt3.31□□□□□ -1.88
VPS4P52917 BUD19YJL188C 309 nt3.31□□□□□ -1.88
VPS4P52917 YJR087WYJR087W 351 nt3.31□□□□□ -1.88
VPS4P52917 YML037CYML037C 1023 nt3.31□□□□□ -1.88
VPS4P52917 ATX1YNL259C 222 nt3.31□□□□□ -1.88
VPS4P52917 PDR17YNL264C 1053 nt3.31□□□□□ -1.88
VPS4P52917 AFT2YPL202C 1251 nt3.31□□□□□ -1.88
VPS4P52917 YPR050CYPR050C 414 nt3.31□□□□□ -1.88
VPS4P52917 YPR170CYPR170C 336 nt3.31□□□□□ -1.88
VPS4P52917 MBA1YBR185C 837 nt3.31□□□□□ -1.88
VPS4P52917 ILS1YBL076C 3219 nt3.31□□□□□ -1.88
VPS4P52917 RIM13YMR154C 2184 nt3.31□□□□□ -1.88
VPS4P52917 SPO14YKR031C 5052 nt3.3□□□□□ -1.88
VPS4P52917 STT4YLR305C 5703 nt3.3□□□□□ -1.88
VPS4P52917 RPL17BYJL177W 555 nt3.3□□□□□ -1.88
VPS4P52917 GMC2YLR445W 567 nt3.3□□□□□ -1.88
VPS4P52917 YNL235CYNL235C 432 nt3.3□□□□□ -1.88
VPS4P52917 CSM4YPL200W 471 nt3.3□□□□□ -1.88
VPS4P52917 UBP15YMR304W 3693 nt3.3□□□□□ -1.88
VPS4P52917 DNA2YHR164C 4569 nt3.3□□□□□ -1.88
VPS4P52917 MAK5YBR142W 2322 nt3.3□□□□□ -1.88
VPS4P52917 ATG13YPR185W 2217 nt3.29□□□□□ -1.88
VPS4P52917 CDC55YGL190C 1581 nt3.29□□□□□ -1.88
VPS4P52917 SAP1YER047C 2694 nt3.29□□□□□ -1.88
VPS4P52917 ASI3YNL008C 2031 nt3.29□□□□□ -1.88
VPS4P52917 snR9snR9 187 nt3.29□□□□□ -1.88
VPS4P52917 YDR029WYDR029W 315 nt3.29□□□□□ -1.88
VPS4P52917 VMA21YGR105W 234 nt3.29□□□□□ -1.88
VPS4P52917 RPS23AYGR118W 438 nt3.29□□□□□ -1.88
VPS4P52917 YHL005CYHL005C 393 nt3.29□□□□□ -1.88
VPS4P52917 PCL5YHR071W 690 nt3.29□□□□□ -1.88
VPS4P52917 YAP5YIR018W 738 nt3.29□□□□□ -1.88
VPS4P52917 ASG7YJL170C 630 nt3.29□□□□□ -1.88
VPS4P52917 YLR202CYLR202C 327 nt3.29□□□□□ -1.88
VPS4P52917 PFY1YOR122C 381 nt3.29□□□□□ -1.88
VPS4P52917 YOR277CYOR277C 309 nt3.29□□□□□ -1.88
VPS4P52917 RPS23BYPR132W 438 nt3.29□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 47.1 ms