Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 OLE1YGL055W 1533 nt4.18□□□□□ -1.74
TY1A-ER1P0CX71 TRX2YGR209C 315 nt4.18□□□□□ -1.74
TY1A-ER1P0CX71 CNB1YKL190W 528 nt4.18□□□□□ -1.74
TY1A-ER1P0CX71 ATG12YBR217W 561 nt4.18□□□□□ -1.74
TY1A-ER1P0CX71 YBR259WYBR259W 2067 nt4.18□□□□□ -1.74
TY1A-ER1P0CX71 GDH2YDL215C 3279 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 YEL1YBL060W 2064 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 RPS29BYDL061C 171 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 PFK1YGR240C 2964 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 YHL034W-AYHL034W-A 462 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 RPL39YJL189W 156 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 INN1YNL152W 1230 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 PEX17YNL214W 600 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 PRM15YMR278W 1869 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 DIT2YDR402C 1470 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 NHX1YDR456W 1902 nt4.17□□□□□ -1.74
TY1A-ER1P0CX71 DSF1YEL070W 1509 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 YNR073CYNR073C 1509 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 MSH4YFL003C 2637 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 VIP1YLR410W 3441 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 EMI1YDR512C 564 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 GRX2YDR513W 432 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 YER038W-AYER038W-A 381 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 YFR054CYFR054C 579 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 YJR111CYJR111C 852 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 YMR290W-AYMR290W-A 348 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 YPT53YNL093W 663 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 YOL114CYOL114C 609 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 AAD15YOL165C 432 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 CBC2YPL178W 627 nt4.16□□□□□ -1.74
TY1A-ER1P0CX71 TRM44YPL030W 1704 nt4.15□□□□□ -1.74
TY1A-ER1P0CX71 NOC2YOR206W 2133 nt4.15□□□□□ -1.74
TY1A-ER1P0CX71 YFL032WYFL032W 321 nt4.15□□□□□ -1.75
TY1A-ER1P0CX71 JIP3YLR331C 378 nt4.15□□□□□ -1.75
TY1A-ER1P0CX71 YLR428CYLR428C 345 nt4.15□□□□□ -1.75
TY1A-ER1P0CX71 RPL19BYBL027W 570 nt4.15□□□□□ -1.75
TY1A-ER1P0CX71 BIL1YOR304C-A 231 nt4.15□□□□□ -1.75
TY1A-ER1P0CX71 YPL276WYPL276W 438 nt4.15□□□□□ -1.75
TY1A-ER1P0CX71 GAL10YBR019C 2100 nt4.15□□□□□ -1.75
TY1A-ER1P0CX71 NIC96YFR002W 2520 nt4.15□□□□□ -1.75
TY1A-ER1P0CX71 UPC2YDR213W 2742 nt4.15□□□□□ -1.75
TY1A-ER1P0CX71 MDM30YLR368W 1797 nt4.14□□□□□ -1.75
TY1A-ER1P0CX71 ABF1YKL112W 2196 nt4.14□□□□□ -1.75
TY1A-ER1P0CX71 SSB1YDL229W 1842 nt4.14□□□□□ -1.75
TY1A-ER1P0CX71 SSB2YNL209W 1842 nt4.14□□□□□ -1.75
TY1A-ER1P0CX71 HTA1YDR225W 399 nt4.14□□□□□ -1.75
TY1A-ER1P0CX71 MED1YPR070W 1701 nt4.14□□□□□ -1.75
TY1A-ER1P0CX71 FRE4YNR060W 2160 nt4.14□□□□□ -1.75
TY1A-ER1P0CX71 SKG6YHR149C 2205 nt4.14□□□□□ -1.75
TY1A-ER1P0CX71 NUP85YJR042W 2235 nt4.14□□□□□ -1.75
TY1A-ER1P0CX71 SRC1YML034W 2505 nt4.14□□□□□ -1.75
TY1A-ER1P0CX71 YCK2YNL154C 1641 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 YDL034WYDL034W 345 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 YGL042CYGL042C 306 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 MLC1YGL106W 450 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 VEL1YGL258W 621 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 YGR242WYGR242W 309 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 UBC7YMR022W 498 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 YOR146WYOR146W 306 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 YOR192C-CYOR192C-C 237 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 HOP1YIL072W 1818 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 STE5YDR103W 2754 nt4.13□□□□□ -1.75
TY1A-ER1P0CX71 GAC1YOR178C 2382 nt4.12□□□□□ -1.75
TY1A-ER1P0CX71 MUB1YMR100W 1863 nt4.12□□□□□ -1.75
TY1A-ER1P0CX71 IMD4YML056C 1575 nt4.12□□□□□ -1.75
TY1A-ER1P0CX71 YDR102CYDR102C 333 nt4.12□□□□□ -1.75
TY1A-ER1P0CX71 COX26YDR119W-A 201 nt4.12□□□□□ -1.75
TY1A-ER1P0CX71 YHR007C-AYHR007C-A 216 nt4.12□□□□□ -1.75
TY1A-ER1P0CX71 HSP10YOR020C 321 nt4.12□□□□□ -1.75
TY1A-ER1P0CX71 CTT1YGR088W 1689 nt4.12□□□□□ -1.75
TY1A-ER1P0CX71 ISM1YPL040C 3009 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 NUG1YER006W 1563 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 DIE2YGR227W 1578 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 YCR047W-AYCR047W-A 207 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 ARF2YDL137W 546 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 YDR442WYDR442W 393 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 GCN4YEL009C 846 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 RTT105YER104W 627 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 RPP0YLR340W 939 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 YPR010C-AYPR010C-A 219 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 snR36snR36 182 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 MKT1YNL085W 2493 nt4.11□□□□□ -1.75
TY1A-ER1P0CX71 HBT1YDL223C 3141 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 YPS6YIR039C 1614 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 YER158CYER158C 1722 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 SRP68YPL243W 1800 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 AHA1YDR214W 1053 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 ATP5YDR298C 639 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 CDC26YFR036W 375 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 GPP1YIL053W 753 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 HIS5YIL116W 1158 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 YLR230WYLR230W 306 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 ADI1YMR009W 540 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 YOR385WYOR385W 873 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 YOP1YPR028W 543 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 JIP5YPR169W 1479 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 MRK1YDL079C 1506 nt4.1□□□□□ -1.75
TY1A-ER1P0CX71 YAP1802YGR241C 1707 nt4.09□□□□□ -1.75
TY1A-ER1P0CX71 VAC7YNL054W 3498 nt4.09□□□□□ -1.75
TY1A-ER1P0CX71 YGL007C-AYGL007C-A 87 nt4.09□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 58.5 ms