Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV1A0A0A0MS02 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 AC027612.3-201ENST00000413684 1047 ntBASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 HCG11-201ENST00000411553 5696 ntBASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV1A0A0A0MS02 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV1A0A0A0MS02 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV1A0A0A0MS02 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV1A0A0A0MS02 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
TRGV1A0A0A0MS02 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV1A0A0A0MS02 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV1A0A0A0MS02 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.08■□□□□ 0.01
TRGV1A0A0A0MS02 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV1A0A0A0MS02 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV1A0A0A0MS02 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV1A0A0A0MS02 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 LINC02228-203ENST00000641970 1355 ntBASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRGV1A0A0A0MS02 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms