Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 OXCT2P1-201ENST00000447263 1535 ntBASIC17.98■□□□□ 0.47
BEST4Q8NFU0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
BEST4Q8NFU0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
BEST4Q8NFU0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 AC010997.5-201ENST00000609182 354 ntBASIC17.96■□□□□ 0.47
BEST4Q8NFU0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 AL049796.1-201ENST00000565336 1766 ntBASIC17.96■□□□□ 0.47
BEST4Q8NFU0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST4Q8NFU0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
BEST4Q8NFU0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
BEST4Q8NFU0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 Z92544.1-202ENST00000571933 1220 ntBASIC17.95■□□□□ 0.46
BEST4Q8NFU0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 AC241377.3-202ENST00000626088 1088 ntBASIC17.95■□□□□ 0.46
BEST4Q8NFU0 AC241585.3-202ENST00000628937 1088 ntBASIC17.95■□□□□ 0.46
BEST4Q8NFU0 AC245100.8-202ENST00000629247 1058 ntBASIC17.95■□□□□ 0.46
BEST4Q8NFU0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST4Q8NFU0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.94■□□□□ 0.46
BEST4Q8NFU0 AC133637.1-201ENST00000624115 1537 ntBASIC17.94■□□□□ 0.46
BEST4Q8NFU0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 AL451085.2-201ENST00000605085 799 ntBASIC17.94■□□□□ 0.46
BEST4Q8NFU0 MIR4787-201ENST00000607364 84 ntBASIC17.94■□□□□ 0.46
BEST4Q8NFU0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST4Q8NFU0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms