Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 RPC40YPR110C 1008 nt3.2□□□□□ -1.9
SEF1P34228 YPR153WYPR153W 423 nt3.2□□□□□ -1.9
SEF1P34228 NUR1YDL089W 1455 nt3.2□□□□□ -1.9
SEF1P34228 MDV1YJL112W 2145 nt3.2□□□□□ -1.9
SEF1P34228 MPS1YDL028C 2295 nt3.19□□□□□ -1.9
SEF1P34228 UBP5YER144C 2418 nt3.19□□□□□ -1.9
SEF1P34228 URA2YJL130C 6645 nt3.19□□□□□ -1.9
SEF1P34228 VPS3YDR495C 3036 nt3.19□□□□□ -1.9
SEF1P34228 SRD1YCR018C 666 nt3.19□□□□□ -1.9
SEF1P34228 RTT105YER104W 627 nt3.19□□□□□ -1.9
SEF1P34228 YGR018CYGR018C 330 nt3.19□□□□□ -1.9
SEF1P34228 YIL046W-AYIL046W-A 165 nt3.19□□□□□ -1.9
SEF1P34228 REC102YLR329W 795 nt3.19□□□□□ -1.9
SEF1P34228 PDR17YNL264C 1053 nt3.19□□□□□ -1.9
SEF1P34228 MPD2YOL088C 834 nt3.19□□□□□ -1.9
SEF1P34228 MUB1YMR100W 1863 nt3.19□□□□□ -1.9
SEF1P34228 LCB4YOR171C 1875 nt3.19□□□□□ -1.9
SEF1P34228 PFK26YIL107C 2484 nt3.18□□□□□ -1.9
SEF1P34228 MUS81YDR386W 1899 nt3.18□□□□□ -1.9
SEF1P34228 JIP5YPR169W 1479 nt3.18□□□□□ -1.9
SEF1P34228 AVT5YBL089W 1380 nt3.18□□□□□ -1.9
SEF1P34228 SLD5YDR489W 885 nt3.18□□□□□ -1.9
SEF1P34228 SEC53YFL045C 765 nt3.18□□□□□ -1.9
SEF1P34228 YKL070WYKL070W 510 nt3.18□□□□□ -1.9
SEF1P34228 OST6YML019W 999 nt3.18□□□□□ -1.9
SEF1P34228 YNL013CYNL013C 378 nt3.18□□□□□ -1.9
SEF1P34228 GRE2YOL151W 1029 nt3.18□□□□□ -1.9
SEF1P34228 PFY1YOR122C 381 nt3.18□□□□□ -1.9
SEF1P34228 YPL119C-AYPL119C-A 264 nt3.18□□□□□ -1.9
SEF1P34228 ADF1YCL058W-A 342 nt3.18□□□□□ -1.9
SEF1P34228 SMC2YFR031C 3513 nt3.18□□□□□ -1.9
SEF1P34228 SSM4YIL030C 3960 nt3.18□□□□□ -1.9
SEF1P34228 21S_rRNA21S_rRNA 3296 nt3.18□□□□□ -1.9
SEF1P34228 GYL1YMR192W 2163 nt3.17□□□□□ -1.9
SEF1P34228 YAK1YJL141C 2424 nt3.17□□□□□ -1.9
SEF1P34228 YCR013CYCR013C 648 nt3.17□□□□□ -1.9
SEF1P34228 CPR5YDR304C 678 nt3.17□□□□□ -1.9
SEF1P34228 YGR226CYGR226C 210 nt3.17□□□□□ -1.9
SEF1P34228 QCR10YHR001W-A 234 nt3.17□□□□□ -1.9
SEF1P34228 ANB1YJR047C 474 nt3.17□□□□□ -1.9
SEF1P34228 SDS22YKL193C 1017 nt3.17□□□□□ -1.9
SEF1P34228 YLR271WYLR271W 825 nt3.17□□□□□ -1.9
SEF1P34228 TIM12YBR091C 330 nt3.17□□□□□ -1.9
SEF1P34228 SIZ1YDR409W 2715 nt3.17□□□□□ -1.9
SEF1P34228 HBT1YDL223C 3141 nt3.17□□□□□ -1.9
SEF1P34228 AKR1YDR264C 2295 nt3.16□□□□□ -1.9
SEF1P34228 OPI6YDL096C 327 nt3.16□□□□□ -1.9
SEF1P34228 HLR1YDR528W 1272 nt3.16□□□□□ -1.9
SEF1P34228 YFR054CYFR054C 579 nt3.16□□□□□ -1.9
SEF1P34228 MND1YGL183C 660 nt3.16□□□□□ -1.9
SEF1P34228 YNL089CYNL089C 477 nt3.16□□□□□ -1.9
SEF1P34228 SHG1YBR258C 429 nt3.16□□□□□ -1.9
SEF1P34228 UBP8YMR223W 1416 nt3.16□□□□□ -1.9
SEF1P34228 YCG1YDR325W 3108 nt3.16□□□□□ -1.9
SEF1P34228 ANR2YKL047W 1551 nt3.16□□□□□ -1.9
SEF1P34228 DAN4YJR151C 3486 nt3.16□□□□□ -1.9
SEF1P34228 YDR061WYDR061W 1620 nt3.15□□□□□ -1.9
SEF1P34228 BRE5YNR051C 1548 nt3.15□□□□□ -1.9
SEF1P34228 KEI1YDR367W 666 nt3.15□□□□□ -1.91
SEF1P34228 EMI1YDR512C 564 nt3.15□□□□□ -1.91
SEF1P34228 YIP1YGR172C 747 nt3.15□□□□□ -1.91
SEF1P34228 YKL091CYKL091C 933 nt3.15□□□□□ -1.91
SEF1P34228 YNL109WYNL109W 546 nt3.15□□□□□ -1.91
SEF1P34228 CAT5YOR125C 702 nt3.15□□□□□ -1.91
SEF1P34228 SUS1YBR111W-A 291 nt3.15□□□□□ -1.91
SEF1P34228 TIF4631YGR162W 2859 nt3.15□□□□□ -1.91
SEF1P34228 MNT3YIL014W 1893 nt3.15□□□□□ -1.91
SEF1P34228 YFL002W-BYFL002W-B 1317 nt3.15□□□□□ -1.91
SEF1P34228 YGR161W-AYGR161W-A 1317 nt3.15□□□□□ -1.91
SEF1P34228 YBL100W-AYBL100W-A 1317 nt3.15□□□□□ -1.91
SEF1P34228 YCL020WYCL020W 1317 nt3.15□□□□□ -1.91
SEF1P34228 FRE8YLR047C 2061 nt3.15□□□□□ -1.91
SEF1P34228 SSE2YBR169C 2082 nt3.15□□□□□ -1.91
SEF1P34228 IOC3YFR013W 2364 nt3.15□□□□□ -1.91
SEF1P34228 SKP2YNL311C 2292 nt3.14□□□□□ -1.91
SEF1P34228 SLK19YOR195W 2466 nt3.14□□□□□ -1.91
SEF1P34228 EMP70YLR083C 2004 nt3.14□□□□□ -1.91
SEF1P34228 USE1YGL098W 738 nt3.14□□□□□ -1.91
SEF1P34228 YHR050W-AYHR050W-A 171 nt3.14□□□□□ -1.91
SEF1P34228 YET1YKL065C 621 nt3.14□□□□□ -1.91
SEF1P34228 YAL064W-BYAL064W-B 381 nt3.14□□□□□ -1.91
SEF1P34228 RIM11YMR139W 1113 nt3.14□□□□□ -1.91
SEF1P34228 SSN8YNL025C 972 nt3.14□□□□□ -1.91
SEF1P34228 YOR277CYOR277C 309 nt3.14□□□□□ -1.91
SEF1P34228 YBR259WYBR259W 2067 nt3.14□□□□□ -1.91
SEF1P34228 LST4YKL176C 2487 nt3.14□□□□□ -1.91
SEF1P34228 SLF1YDR515W 1344 nt3.14□□□□□ -1.91
SEF1P34228 SHQ1YIL104C 1524 nt3.14□□□□□ -1.91
SEF1P34228 MDN1YLR106C 14733 nt3.13□□□□□ -1.91
SEF1P34228 RPB9YGL070C 369 nt3.13□□□□□ -1.91
SEF1P34228 VEL1YGL258W 621 nt3.13□□□□□ -1.91
SEF1P34228 THG1YGR024C 714 nt3.13□□□□□ -1.91
SEF1P34228 MVB12YGR206W 306 nt3.13□□□□□ -1.91
SEF1P34228 PET54YGR222W 882 nt3.13□□□□□ -1.91
SEF1P34228 DSE2YHR143W 978 nt3.13□□□□□ -1.91
SEF1P34228 RPC37YKR025W 849 nt3.13□□□□□ -1.91
SEF1P34228 YLL044WYLL044W 447 nt3.13□□□□□ -1.91
SEF1P34228 ECI1YLR284C 843 nt3.13□□□□□ -1.91
SEF1P34228 DYN3YMR299C 939 nt3.13□□□□□ -1.91
SEF1P34228 GIM3YNL153C 390 nt3.13□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 27.9 ms