Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 YBR090CYBR090C 369 nt2.25□□□□□ -2.05
TY1B-PR3P0C2J1 CSH1YBR161W 1131 nt2.25□□□□□ -2.05
TY1B-PR3P0C2J1 YJL113WYJL113W 4647 nt2.25□□□□□ -2.05
TY1B-PR3P0C2J1 SWA2YDR320C 2007 nt2.24□□□□□ -2.05
TY1B-PR3P0C2J1 TFA1YKL028W 1449 nt2.24□□□□□ -2.05
TY1B-PR3P0C2J1 UBP3YER151C 2739 nt2.24□□□□□ -2.05
TY1B-PR3P0C2J1 NOP6YDL213C 678 nt2.24□□□□□ -2.05
TY1B-PR3P0C2J1 CLU1YMR012W 3834 nt2.24□□□□□ -2.05
TY1B-PR3P0C2J1 YBL029C-AYBL029C-A 285 nt2.23□□□□□ -2.05
TY1B-PR3P0C2J1 YBL096CYBL096C 309 nt2.23□□□□□ -2.05
TY1B-PR3P0C2J1 SIR3YLR442C 2937 nt2.23□□□□□ -2.05
TY1B-PR3P0C2J1 BNI1YNL271C 5862 nt2.23□□□□□ -2.05
TY1B-PR3P0C2J1 YBP1YBR216C 2025 nt2.23□□□□□ -2.05
TY1B-PR3P0C2J1 SLX9YGR081C 633 nt2.23□□□□□ -2.05
TY1B-PR3P0C2J1 HPA2YPR193C 471 nt2.23□□□□□ -2.05
TY1B-PR3P0C2J1 PHR1YOR386W 1698 nt2.23□□□□□ -2.05
TY1B-PR3P0C2J1 DSN1YIR010W 1731 nt2.22□□□□□ -2.05
TY1B-PR3P0C2J1 VPS35YJL154C 2835 nt2.22□□□□□ -2.05
TY1B-PR3P0C2J1 YML003WYML003W 873 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 PAN2YGL094C 3348 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 BUD3YCL014W 4911 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 tH(GUG)E1tH(GUG)E1 72 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 tH(GUG)E2tH(GUG)E2 72 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 tH(GUG)G1tH(GUG)G1 72 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 tH(GUG)G2tH(GUG)G2 72 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 tH(GUG)HtH(GUG)H 72 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 tH(GUG)KtH(GUG)K 72 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 tH(GUG)MtH(GUG)M 72 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 SCP1YOR367W 603 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 YPR177CYPR177C 372 nt2.21□□□□□ -2.06
TY1B-PR3P0C2J1 ALG1YBR110W 1350 nt2.2□□□□□ -2.06
TY1B-PR3P0C2J1 YIL102CYIL102C 306 nt2.2□□□□□ -2.06
TY1B-PR3P0C2J1 APM3YBR288C 1452 nt2.2□□□□□ -2.06
TY1B-PR3P0C2J1 YDR098C-BYDR098C-B 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YDR210C-DYDR210C-D 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YDR316W-BYDR316W-B 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YDR365W-BYDR365W-B 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YER138CYER138C 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YER160CYER160C 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YGR038C-BYGR038C-B 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YGR161C-DYGR161C-D 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YJR027WYJR027W 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YLR157C-BYLR157C-B 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YML039WYML039W 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YML045WYML045W 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YMR050CYMR050C 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YOL103W-BYOL103W-B 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YBR012W-BYBR012W-B 5271 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YOR142W-BYOR142W-B 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YPL257W-BYPL257W-B 5268 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YPR158W-BYPR158W-B 5271 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 TAM41YGR046W 1158 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 YJL015CYJL015C 285 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 MRPL33YMR286W 261 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 DUF1YOL087C 3351 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 GSH2YOL049W 1476 nt2.19□□□□□ -2.06
TY1B-PR3P0C2J1 ATP17YDR377W 306 nt2.18□□□□□ -2.06
TY1B-PR3P0C2J1 PEX21YGR239C 867 nt2.18□□□□□ -2.06
TY1B-PR3P0C2J1 GLG2YJL137C 1143 nt2.18□□□□□ -2.06
TY1B-PR3P0C2J1 CLB4YLR210W 1383 nt2.18□□□□□ -2.06
TY1B-PR3P0C2J1 YEL032C-AYEL032C-A 162 nt2.18□□□□□ -2.06
TY1B-PR3P0C2J1 NDL1YLR254C 570 nt2.18□□□□□ -2.06
TY1B-PR3P0C2J1 CDC73YLR418C 1182 nt2.18□□□□□ -2.06
TY1B-PR3P0C2J1 VMA9YCL005W-A 222 nt2.18□□□□□ -2.06
TY1B-PR3P0C2J1 PHO81YGR233C 3537 nt2.17□□□□□ -2.06
TY1B-PR3P0C2J1 ORC2YBR060C 1863 nt2.17□□□□□ -2.06
TY1B-PR3P0C2J1 OST1YJL002C 1431 nt2.17□□□□□ -2.06
TY1B-PR3P0C2J1 PCK1YKR097W 1650 nt2.17□□□□□ -2.06
TY1B-PR3P0C2J1 SNF11YDR073W 510 nt2.17□□□□□ -2.06
TY1B-PR3P0C2J1 SSN8YNL025C 972 nt2.17□□□□□ -2.06
TY1B-PR3P0C2J1 SYC1YOR179C 567 nt2.17□□□□□ -2.06
TY1B-PR3P0C2J1 SPO75YLL005C 2607 nt2.17□□□□□ -2.06
TY1B-PR3P0C2J1 SMY2YBR172C 2223 nt2.17□□□□□ -2.06
TY1B-PR3P0C2J1 ATG32YIL146C 1590 nt2.16□□□□□ -2.06
TY1B-PR3P0C2J1 FIG4YNL325C 2640 nt2.16□□□□□ -2.06
TY1B-PR3P0C2J1 SCL1YGL011C 759 nt2.16□□□□□ -2.06
TY1B-PR3P0C2J1 YAE1YJR067C 426 nt2.16□□□□□ -2.06
TY1B-PR3P0C2J1 FOL3YMR113W 1284 nt2.16□□□□□ -2.06
TY1B-PR3P0C2J1 MCD1YDL003W 1701 nt2.16□□□□□ -2.06
TY1B-PR3P0C2J1 PKR1YMR123W 369 nt2.15□□□□□ -2.06
TY1B-PR3P0C2J1 YNL035CYNL035C 1170 nt2.15□□□□□ -2.06
TY1B-PR3P0C2J1 YPR089WYPR089W 2667 nt2.15□□□□□ -2.07
TY1B-PR3P0C2J1 ELG1YOR144C 2376 nt2.15□□□□□ -2.07
TY1B-PR3P0C2J1 UBP8YMR223W 1416 nt2.15□□□□□ -2.07
TY1B-PR3P0C2J1 YHR071C-AYHR071C-A 321 nt2.14□□□□□ -2.07
TY1B-PR3P0C2J1 MAC1YMR021C 1254 nt2.14□□□□□ -2.07
TY1B-PR3P0C2J1 TOP2YNL088W 4287 nt2.14□□□□□ -2.07
TY1B-PR3P0C2J1 NEL1YHR035W 1893 nt2.13□□□□□ -2.07
TY1B-PR3P0C2J1 RPS25AYGR027C 327 nt2.13□□□□□ -2.07
TY1B-PR3P0C2J1 TPM2YIL138C 486 nt2.13□□□□□ -2.07
TY1B-PR3P0C2J1 APM1YPL259C 1428 nt2.13□□□□□ -2.07
TY1B-PR3P0C2J1 YKU80YMR106C 1890 nt2.12□□□□□ -2.07
TY1B-PR3P0C2J1 YNL235CYNL235C 432 nt2.12□□□□□ -2.07
TY1B-PR3P0C2J1 YKR047WYKR047W 306 nt2.11□□□□□ -2.07
TY1B-PR3P0C2J1 COS3YML132W 1140 nt2.11□□□□□ -2.07
TY1B-PR3P0C2J1 PIS1YPR113W 663 nt2.11□□□□□ -2.07
TY1B-PR3P0C2J1 COS2YBR302C 1140 nt2.11□□□□□ -2.07
TY1B-PR3P0C2J1 RGA2YDR379W 3030 nt2.11□□□□□ -2.07
TY1B-PR3P0C2J1 EPO1YMR124W 2832 nt2.11□□□□□ -2.07
TY1B-PR3P0C2J1 NUP157YER105C 4176 nt2.11□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms