RNA–Protein interactions for RNA: YOR367W

SCP1, Transcript of Component of yeast cortical actin cytoskeleton, yeastyeast

Gene SCP1, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCP1YOR367W MTC1P47018 478 aaKnown RBP15.97■□□□□ 0.15
SCP1YOR367W DRS1P32892 752 aaKnown RBP15.65■□□□□ 0.1
SCP1YOR367W FAP1P53971 965 aa13.64□□□□□ -0.23
SCP1YOR367W DIP2Q12220 943 aaPredicted RBP13.45□□□□□ -0.26
SCP1YOR367W BFR2Q06631 534 aaKnown RBP13.36□□□□□ -0.27
SCP1YOR367W ISW2Q08773 1120 aa13.13□□□□□ -0.31
SCP1YOR367W AVT3P36062 692 aa13.12□□□□□ -0.31
SCP1YOR367W PRI1P10363 409 aa13.05□□□□□ -0.32
SCP1YOR367W RPG1P38249 964 aaKnown RBP12.93□□□□□ -0.34
SCP1YOR367W AAD16Q02895 342 aa12.9□□□□□ -0.34
SCP1YOR367W RSE1Q04693 1361 aaKnown RBP12.82□□□□□ -0.36
SCP1YOR367W PRY3P47033 881 aa12.75□□□□□ -0.37
SCP1YOR367W TSR3Q12094 313 aaKnown RBP12.39□□□□□ -0.43
SCP1YOR367W RPL17AP05740 184 aaKnown RBP12.36□□□□□ -0.43
SCP1YOR367W RPL17BP46990 184 aaKnown RBP12.36□□□□□ -0.43
SCP1YOR367W REB1P21538 810 aa12.28□□□□□ -0.44
SCP1YOR367W TFA1P36100 482 aa12.24□□□□□ -0.45
SCP1YOR367W HAA1Q12753 694 aaKnown RBP12.01□□□□□ -0.49
SCP1YOR367W MRPL32P25348 183 aa11.94□□□□□ -0.5
SCP1YOR367W YCK3P39962 524 aa11.94□□□□□ -0.5
SCP1YOR367W SPT21P35209 758 aa11.83□□□□□ -0.52
SCP1YOR367W RIM101P33400 625 aa11.59□□□□□ -0.55
SCP1YOR367W YKR023WP36119 530 aaKnown RBP11.53□□□□□ -0.56
SCP1YOR367W CDC27P38042 758 aa11.4□□□□□ -0.58
SCP1YOR367W HOP09932 586 aa11.33□□□□□ -0.6
SCP1YOR367W TFC8Q12308 588 aa11.32□□□□□ -0.6
SCP1YOR367W DCD1P06773 312 aa11.25□□□□□ -0.61
SCP1YOR367W YGL015CP33199 130 aa11.24□□□□□ -0.61
SCP1YOR367W OXP1P28273 1286 aa11.2□□□□□ -0.62
SCP1YOR367W RQC2Q12532 1038 aaKnown RBP11.15□□□□□ -0.62
SCP1YOR367W YIL055CP40523 627 aaKnown RBP11.13□□□□□ -0.63
SCP1YOR367W PTP3P40048 928 aa11.09□□□□□ -0.63
SCP1YOR367W UBP10P53874 792 aaPredicted RBP11.04□□□□□ -0.64
SCP1YOR367W YAH1Q12184 172 aaKnown RBP11.03□□□□□ -0.64
SCP1YOR367W BCH2P36122 765 aa10.98□□□□□ -0.65
SCP1YOR367W MAP2P38174 421 aaKnown RBP10.98□□□□□ -0.65
SCP1YOR367W SSP1P38871 571 aa10.92□□□□□ -0.66
SCP1YOR367W RSM7P47150 247 aa10.92□□□□□ -0.66
SCP1YOR367W SCY1P53009 804 aa10.91□□□□□ -0.66
SCP1YOR367W YLR271WQ06152 274 aa10.83□□□□□ -0.68
SCP1YOR367W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.83□□□□□ -0.68not detected
SCP1YOR367W EPS1P40557 701 aa10.77□□□□□ -0.69
SCP1YOR367W BBC1P47068 1157 aa10.77□□□□□ -0.69
SCP1YOR367W AI2P03876 854 aa10.76□□□□□ -0.69
SCP1YOR367W SLX5P32828 619 aaKnown RBP10.75□□□□□ -0.69
SCP1YOR367W BDF1P35817 686 aa10.7□□□□□ -0.7
SCP1YOR367W TIF4632P39936 914 aaKnown RBP10.63□□□□□ -0.71
SCP1YOR367W PSD2P53037 1138 aaKnown RBP10.59□□□□□ -0.71
SCP1YOR367W MGA2P40578 1113 aa10.58□□□□□ -0.72
SCP1YOR367W TGL3P40308 642 aa10.51□□□□□ -0.73
SCP1YOR367W CST9Q06032 482 aa10.48□□□□□ -0.73
SCP1YOR367W MRM1P25270 412 aa10.41□□□□□ -0.74
SCP1YOR367W NSR1P27476 414 aaKnown RBP RIP-Chip data10.26□□□□□ -0.77not detected
SCP1YOR367W RTG3P38165 486 aa10.26□□□□□ -0.77
SCP1YOR367W TAF7Q05021 590 aa10.24□□□□□ -0.77
SCP1YOR367W YAP5P40574 245 aa10.22□□□□□ -0.77
SCP1YOR367W YOR238WQ08634 303 aa10.19□□□□□ -0.78
SCP1YOR367W RCR1P38212 213 aa10.15□□□□□ -0.78
SCP1YOR367W VPS29P38759 282 aa10.12□□□□□ -0.79
SCP1YOR367W YMR1P47147 688 aaKnown RBP RIP-Chip data10.12□□□□□ -0.79not detected
SCP1YOR367W MST1P07236 462 aa10.11□□□□□ -0.79
SCP1YOR367W DMA1P38823 416 aa10.11□□□□□ -0.79
SCP1YOR367W DBP1P24784 617 aaKnown RBP10.05□□□□□ -0.8
SCP1YOR367W PIB1Q06651 286 aa10.05□□□□□ -0.8
SCP1YOR367W RAM2P29703 316 aa10.04□□□□□ -0.8
SCP1YOR367W UBP9P39967 754 aa10.03□□□□□ -0.8
SCP1YOR367W YFR006WP43590 535 aa10.02□□□□□ -0.81
SCP1YOR367W STS1P38637 319 aa10.01□□□□□ -0.81
SCP1YOR367W GTT3P39996 337 aa10.01□□□□□ -0.81
SCP1YOR367W MAK11P20484 414 aaKnown RBP9.97□□□□□ -0.81
SCP1YOR367W BUD31P25337 157 aaPredicted RBP9.95□□□□□ -0.82
SCP1YOR367W VMA1P17255 1071 aaKnown RBP9.88□□□□□ -0.83
SCP1YOR367W YBL029C-AQ3E756 94 aa9.88□□□□□ -0.83
SCP1YOR367W WSC3Q12215 556 aa9.87□□□□□ -0.83
SCP1YOR367W MIF2P35201 549 aa9.85□□□□□ -0.83
SCP1YOR367W COQ8P27697 501 aa9.82□□□□□ -0.84
SCP1YOR367W VNX1P42839 908 aa9.8□□□□□ -0.84
SCP1YOR367W SAM3Q08986 587 aa9.79□□□□□ -0.84
SCP1YOR367W LEO1P38439 464 aa9.77□□□□□ -0.85
SCP1YOR367W SET1P38827 1080 aaKnown RBP9.77□□□□□ -0.85
SCP1YOR367W YOL036WQ08206 761 aa9.76□□□□□ -0.85
SCP1YOR367W MSB4Q12317 492 aa9.76□□□□□ -0.85
SCP1YOR367W EDS1P38073 919 aa9.75□□□□□ -0.85
SCP1YOR367W SET4P42948 560 aa9.75□□□□□ -0.85
SCP1YOR367W SPP1Q03012 353 aa9.75□□□□□ -0.85
SCP1YOR367W NOP53Q12080 455 aaKnown RBP9.72□□□□□ -0.85
SCP1YOR367W GYP5Q12344 894 aa9.72□□□□□ -0.85
SCP1YOR367W PTC3P34221 468 aaKnown RBP9.71□□□□□ -0.86
SCP1YOR367W TIF11P38912 153 aaKnown RBP9.71□□□□□ -0.86
SCP1YOR367W EAP1P36041 632 aaKnown RBP9.69□□□□□ -0.86
SCP1YOR367W GRE2Q12068 342 aaKnown RBP9.69□□□□□ -0.86
SCP1YOR367W ABP1P15891 592 aaKnown RBP9.68□□□□□ -0.86
SCP1YOR367W ATH1P48016 1211 aa9.67□□□□□ -0.86
SCP1YOR367W ULI1P43604 169 aa9.65□□□□□ -0.86
SCP1YOR367W IFH1P39520 1085 aa9.64□□□□□ -0.87
SCP1YOR367W DCW1P36091 449 aa9.63□□□□□ -0.87
SCP1YOR367W GUT1P32190 709 aa9.62□□□□□ -0.87
SCP1YOR367W HTA1P04911 132 aaKnown RBP9.61□□□□□ -0.87
SCP1YOR367W HTA2P04912 132 aa9.61□□□□□ -0.87
SCP1YOR367W TRP5P00931 707 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms