RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C DRS1P32892 752 aaKnown RBP15.25■□□□□ 0.03
SCL1YGL011C MTC1P47018 478 aaKnown RBP15.06■□□□□ 0
SCL1YGL011C FAP1P53971 965 aa13.37□□□□□ -0.27
SCL1YGL011C BFR2Q06631 534 aaKnown RBP13.24□□□□□ -0.29
SCL1YGL011C DIP2Q12220 943 aaPredicted RBP12.92□□□□□ -0.34
SCL1YGL011C AVT3P36062 692 aa12.8□□□□□ -0.36
SCL1YGL011C PRY3P47033 881 aa12.66□□□□□ -0.38
SCL1YGL011C TFA1P36100 482 aa12.51□□□□□ -0.41
SCL1YGL011C ISW2Q08773 1120 aa12.19□□□□□ -0.46
SCL1YGL011C RSE1Q04693 1361 aaKnown RBP12.17□□□□□ -0.46
SCL1YGL011C RPG1P38249 964 aaKnown RBP12.06□□□□□ -0.48
SCL1YGL011C PRI1P10363 409 aa12.02□□□□□ -0.49
SCL1YGL011C YCK3P39962 524 aa11.9□□□□□ -0.5
SCL1YGL011C AAD16Q02895 342 aa11.78□□□□□ -0.52
SCL1YGL011C HAA1Q12753 694 aaKnown RBP11.75□□□□□ -0.53
SCL1YGL011C RPL17AP05740 184 aaKnown RBP11.74□□□□□ -0.53
SCL1YGL011C RPL17BP46990 184 aaKnown RBP11.74□□□□□ -0.53
SCL1YGL011C REB1P21538 810 aa11.55□□□□□ -0.56
SCL1YGL011C TSR3Q12094 313 aaKnown RBP11.46□□□□□ -0.57
SCL1YGL011C SPT21P35209 758 aa11.31□□□□□ -0.6
SCL1YGL011C RIM101P33400 625 aa11.15□□□□□ -0.62
SCL1YGL011C MRPL32P25348 183 aa10.96□□□□□ -0.65
SCL1YGL011C YKR023WP36119 530 aaKnown RBP10.91□□□□□ -0.66
SCL1YGL011C PTP3P40048 928 aa10.88□□□□□ -0.67
SCL1YGL011C OXP1P28273 1286 aa10.84□□□□□ -0.67
SCL1YGL011C HOP09932 586 aa10.71□□□□□ -0.69
SCL1YGL011C SSP1P38871 571 aa10.71□□□□□ -0.69
SCL1YGL011C YAH1Q12184 172 aaKnown RBP10.7□□□□□ -0.7
SCL1YGL011C CDC27P38042 758 aa10.68□□□□□ -0.7
SCL1YGL011C TFC8Q12308 588 aa10.68□□□□□ -0.7
SCL1YGL011C DCD1P06773 312 aa10.65□□□□□ -0.7
SCL1YGL011C YIL055CP40523 627 aaKnown RBP10.64□□□□□ -0.71
SCL1YGL011C RQC2Q12532 1038 aaKnown RBP10.62□□□□□ -0.71
SCL1YGL011C BUD31P25337 157 aaPredicted RBP10.56□□□□□ -0.72
SCL1YGL011C YLR271WQ06152 274 aa10.55□□□□□ -0.72
SCL1YGL011C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.5□□□□□ -0.73not detected
SCL1YGL011C YGL015CP33199 130 aa10.49□□□□□ -0.73
SCL1YGL011C RSM7P47150 247 aa10.48□□□□□ -0.73
SCL1YGL011C BCH2P36122 765 aa10.38□□□□□ -0.75
SCL1YGL011C DMA1P38823 416 aa10.37□□□□□ -0.75
SCL1YGL011C AI2P03876 854 aa10.31□□□□□ -0.76
SCL1YGL011C MGA2P40578 1113 aa10.3□□□□□ -0.76
SCL1YGL011C PSD2P53037 1138 aaKnown RBP10.26□□□□□ -0.77
SCL1YGL011C CST9Q06032 482 aa10.26□□□□□ -0.77
SCL1YGL011C EPS1P40557 701 aa10.23□□□□□ -0.77
SCL1YGL011C BBC1P47068 1157 aa10.21□□□□□ -0.77
SCL1YGL011C SCY1P53009 804 aa10.21□□□□□ -0.77
SCL1YGL011C MAP2P38174 421 aaKnown RBP10.2□□□□□ -0.78
SCL1YGL011C UBP10P53874 792 aaPredicted RBP10.16□□□□□ -0.78
SCL1YGL011C BDF1P35817 686 aa10.13□□□□□ -0.79
SCL1YGL011C MRM1P25270 412 aa10.02□□□□□ -0.81
SCL1YGL011C SLX5P32828 619 aaKnown RBP9.98□□□□□ -0.81
SCL1YGL011C RCR1P38212 213 aa9.91□□□□□ -0.82
SCL1YGL011C RAM2P29703 316 aa9.89□□□□□ -0.83
SCL1YGL011C SIS1P25294 352 aaKnown RBP9.84□□□□□ -0.83
SCL1YGL011C RTG3P38165 486 aa9.84□□□□□ -0.83
SCL1YGL011C VPS29P38759 282 aa9.76□□□□□ -0.85
SCL1YGL011C SAS10Q12136 610 aaPredicted RBP9.74□□□□□ -0.85
SCL1YGL011C TIF4632P39936 914 aaKnown RBP9.72□□□□□ -0.85
SCL1YGL011C MAK11P20484 414 aaKnown RBP9.69□□□□□ -0.86
SCL1YGL011C SET1P38827 1080 aaKnown RBP9.67□□□□□ -0.86
SCL1YGL011C TGL3P40308 642 aa9.65□□□□□ -0.86
SCL1YGL011C YMR1P47147 688 aaKnown RBP RIP-Chip data9.65□□□□□ -0.86not detected
SCL1YGL011C STS1P38637 319 aa9.64□□□□□ -0.87
SCL1YGL011C YFR006WP43590 535 aa9.62□□□□□ -0.87
SCL1YGL011C DBP1P24784 617 aaKnown RBP9.6□□□□□ -0.87
SCL1YGL011C YOR238WQ08634 303 aa9.6□□□□□ -0.87
SCL1YGL011C NSR1P27476 414 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87not detected
SCL1YGL011C COQ8P27697 501 aa9.57□□□□□ -0.88
SCL1YGL011C YAP5P40574 245 aa9.55□□□□□ -0.88
SCL1YGL011C PIB1Q06651 286 aa9.55□□□□□ -0.88
SCL1YGL011C YPR148CQ06523 435 aa9.54□□□□□ -0.88
SCL1YGL011C MIF2P35201 549 aa9.52□□□□□ -0.89
SCL1YGL011C EDS1P38073 919 aa9.51□□□□□ -0.89
SCL1YGL011C VPS70P47161 811 aa9.51□□□□□ -0.89
SCL1YGL011C IFH1P39520 1085 aa9.48□□□□□ -0.89
SCL1YGL011C LEU3P08638 886 aa9.44□□□□□ -0.9
SCL1YGL011C UBP9P39967 754 aa9.43□□□□□ -0.9
SCL1YGL011C VMA1P17255 1071 aaKnown RBP9.41□□□□□ -0.9
SCL1YGL011C NOP53Q12080 455 aaKnown RBP9.41□□□□□ -0.9
SCL1YGL011C PTC3P34221 468 aaKnown RBP9.4□□□□□ -0.9
SCL1YGL011C CKB1P43639 278 aa9.4□□□□□ -0.9
SCL1YGL011C MST1P07236 462 aa9.39□□□□□ -0.91
SCL1YGL011C LEO1P38439 464 aa9.35□□□□□ -0.91
SCL1YGL011C SPB4P25808 606 aaPredicted RBP9.34□□□□□ -0.91
SCL1YGL011C GTT3P39996 337 aa9.31□□□□□ -0.92
SCL1YGL011C SAM3Q08986 587 aa9.29□□□□□ -0.92
SCL1YGL011C PBS2P08018 668 aa9.27□□□□□ -0.93
SCL1YGL011C GRE2Q12068 342 aaKnown RBP9.27□□□□□ -0.93
SCL1YGL011C ATH1P48016 1211 aa9.26□□□□□ -0.93
SCL1YGL011C REF2P42073 533 aaPredicted RBP9.25□□□□□ -0.93
SCL1YGL011C DSF2P38213 736 aa9.24□□□□□ -0.93
SCL1YGL011C GUT1P32190 709 aa9.22□□□□□ -0.93
SCL1YGL011C YOL036WQ08206 761 aa9.22□□□□□ -0.93
SCL1YGL011C GYP5Q12344 894 aa9.22□□□□□ -0.93
SCL1YGL011C SET4P42948 560 aa9.19□□□□□ -0.94
SCL1YGL011C VHR2P40041 505 aa9.17□□□□□ -0.94
SCL1YGL011C WSC3Q12215 556 aa9.17□□□□□ -0.94
SCL1YGL011C RPN1P38764 993 aaKnown RBP9.16□□□□□ -0.94
SCL1YGL011C DCW1P36091 449 aa9.15□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms