Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMCO3A2RU48 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMCO3A2RU48 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMCO3A2RU48 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 AC092028.1-203ENST00000608262 953 ntBASIC16.98■□□□□ 0.31
SMCO3A2RU48 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMCO3A2RU48 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMCO3A2RU48 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMCO3A2RU48 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMCO3A2RU48 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.98■□□□□ 0.31
SMCO3A2RU48 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMCO3A2RU48 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMCO3A2RU48 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMCO3A2RU48 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SMCO3A2RU48 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.97■□□□□ 0.31
SMCO3A2RU48 OR7E47P-201ENST00000546390 1422 ntBASIC16.97■□□□□ 0.31
SMCO3A2RU48 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMCO3A2RU48 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMCO3A2RU48 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMCO3A2RU48 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SMCO3A2RU48 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SMCO3A2RU48 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMCO3A2RU48 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMCO3A2RU48 AC026471.6-201ENST00000622954 1905 ntBASIC16.97■□□□□ 0.31
SMCO3A2RU48 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SMCO3A2RU48 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.97■□□□□ 0.31
SMCO3A2RU48 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMCO3A2RU48 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMCO3A2RU48 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO3A2RU48 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO3A2RU48 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.96■□□□□ 0.31
SMCO3A2RU48 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO3A2RU48 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.96■□□□□ 0.31
SMCO3A2RU48 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SMCO3A2RU48 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO3A2RU48 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.96■□□□□ 0.31
SMCO3A2RU48 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.96■□□□□ 0.31
SMCO3A2RU48 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO3A2RU48 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO3A2RU48 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.96■□□□□ 0.31
SMCO3A2RU48 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SMCO3A2RU48 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO3A2RU48 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO3A2RU48 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SMCO3A2RU48 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO3A2RU48 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.96■□□□□ 0.3
SMCO3A2RU48 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMCO3A2RU48 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
SMCO3A2RU48 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SMCO3A2RU48 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
SMCO3A2RU48 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO3A2RU48 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.95■□□□□ 0.3
SMCO3A2RU48 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO3A2RU48 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO3A2RU48 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO3A2RU48 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.95■□□□□ 0.3
SMCO3A2RU48 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO3A2RU48 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO3A2RU48 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMCO3A2RU48 AC079089.2-201ENST00000531211 1277 ntBASIC16.95■□□□□ 0.3
SMCO3A2RU48 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SMCO3A2RU48 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.95■□□□□ 0.3
SMCO3A2RU48 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO3A2RU48 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO3A2RU48 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.95■□□□□ 0.3
SMCO3A2RU48 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SMCO3A2RU48 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO3A2RU48 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.95■□□□□ 0.3
SMCO3A2RU48 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO3A2RU48 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SMCO3A2RU48 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO3A2RU48 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO3A2RU48 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.94■□□□□ 0.3
SMCO3A2RU48 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SMCO3A2RU48 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO3A2RU48 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO3A2RU48 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SMCO3A2RU48 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO3A2RU48 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO3A2RU48 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO3A2RU48 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
SMCO3A2RU48 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.93■□□□□ 0.3
SMCO3A2RU48 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO3A2RU48 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.93■□□□□ 0.3
SMCO3A2RU48 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO3A2RU48 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO3A2RU48 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.93■□□□□ 0.3
SMCO3A2RU48 AL499627.2-201ENST00000606283 725 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms