RNA–Protein interactions for RNA: ENST00000339362.9

NEO1-202, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEO1, Length 7,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-202ENST00000339362 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
NEO1-202ENST00000339362 PELP1Q8IZL8 1130 aaKnown RBP26.97■■□□□ 1.91
NEO1-202ENST00000339362 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
NEO1-202ENST00000339362 ERICH6Q7L0X2 663 aa26.37■■□□□ 1.81
NEO1-202ENST00000339362 EHMT2Q96KQ7 1210 aa26.32■■□□□ 1.8
NEO1-202ENST00000339362 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
NEO1-202ENST00000339362 MYT1Q01538 1121 aa25.84■■□□□ 1.73
NEO1-202ENST00000339362 CCER1Q8TC90 406 aaPredicted RBP25.78■■□□□ 1.72
NEO1-202ENST00000339362 SHROOM4Q9ULL8 1493 aa25.67■■□□□ 1.7
NEO1-202ENST00000339362 APLP2Q06481 763 aa25.5■■□□□ 1.67
NEO1-202ENST00000339362 TTBK1Q5TCY1 1321 aaPredicted RBP25.45■■□□□ 1.67
NEO1-202ENST00000339362 FAM9AQ8IZU1 332 aaPredicted RBP25.12■■□□□ 1.61
NEO1-202ENST00000339362 CENPBP07199 599 aaPredicted RBP25.12■■□□□ 1.61
NEO1-202ENST00000339362 NEFLP07196 543 aa25■■□□□ 1.59
NEO1-202ENST00000339362 PCGF6Q9BYE7 350 aa25■■□□□ 1.59
NEO1-202ENST00000339362 DAXXQ9UER7 740 aaPredicted RBP24.92■■□□□ 1.58
NEO1-202ENST00000339362 RANGAP1P46060 587 aaPredicted RBP24.91■■□□□ 1.58
NEO1-202ENST00000339362 YTHDC1Q96MU7 727 aaKnown RBP24.9■■□□□ 1.58
NEO1-202ENST00000339362 ATP1B4Q9UN42 357 aaPredicted RBP24.84■■□□□ 1.57
NEO1-202ENST00000339362 POLR3GLQ9BT43 218 aa24.37■■□□□ 1.49
NEO1-202ENST00000339362 CNGB1Q14028 1251 aaPredicted RBP24.29■■□□□ 1.48
NEO1-202ENST00000339362 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
NEO1-202ENST00000339362 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.47
NEO1-202ENST00000339362 MYT1LQ9UL68 1186 aa24.18■■□□□ 1.46
NEO1-202ENST00000339362 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
NEO1-202ENST00000339362 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
NEO1-202ENST00000339362 RTL5Q5HYW3 569 aaPredicted RBP24.1■■□□□ 1.45
NEO1-202ENST00000339362 SLC4A1APQ9BWU0 796 aaKnown RBP24.1■■□□□ 1.45
NEO1-202ENST00000339362 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
NEO1-202ENST00000339362 UBTFP17480 764 aaKnown RBP23.85■■□□□ 1.41
NEO1-202ENST00000339362 PPARGC1BQ86YN6 1023 aaKnown RBP23.83■■□□□ 1.41
NEO1-202ENST00000339362 BCL11AQ9H165 835 aa23.75■■□□□ 1.39
NEO1-202ENST00000339362 ITGAEP38570 1179 aa23.69■■□□□ 1.38
NEO1-202ENST00000339362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.62■■□□□ 1.37
NEO1-202ENST00000339362 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
NEO1-202ENST00000339362 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.37
NEO1-202ENST00000339362 SLC24A1O60721 1099 aa23.56■■□□□ 1.36
NEO1-202ENST00000339362 ZBTB47Q9UFB7 747 aaPredicted RBP23.49■■□□□ 1.35
NEO1-202ENST00000339362 HRCP23327 699 aa23.46■■□□□ 1.35
NEO1-202ENST00000339362 EIF5BO60841 1220 aaKnown RBP23.38■■□□□ 1.33
NEO1-202ENST00000339362 BCANQ96GW7 911 aa23.32■■□□□ 1.32
NEO1-202ENST00000339362 LOC105371045A0A1W2PR82 267 aa23.28■■□□□ 1.32
NEO1-202ENST00000339362 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
NEO1-202ENST00000339362 CDK11AQ9UQ88 783 aaPredicted RBP23.06■■□□□ 1.28
NEO1-202ENST00000339362 ANP32BQ92688 251 aaKnown RBP23.01■■□□□ 1.27
NEO1-202ENST00000339362 NPM2Q86SE8 214 aaKnown RBP22.98■■□□□ 1.27
NEO1-202ENST00000339362 GLIPR1L2Q4G1C9 344 aa22.92■■□□□ 1.26
NEO1-202ENST00000339362 HSP90AA1P07900 732 aaKnown RBP22.85■■□□□ 1.25
NEO1-202ENST00000339362 ZNF326Q5BKZ1 582 aaKnown RBP22.83■■□□□ 1.24
NEO1-202ENST00000339362 ARXQ96QS3 562 aa22.82■■□□□ 1.24
NEO1-202ENST00000339362 DIEXFQ68CQ4 756 aaKnown RBP22.81■■□□□ 1.24
NEO1-202ENST00000339362 TRIM52Q96A61 297 aa22.8■■□□□ 1.24
NEO1-202ENST00000339362 ANP32AP39687 249 aaKnown RBP22.79■■□□□ 1.24
NEO1-202ENST00000339362 CDK11BP21127 795 aaKnown RBP22.79■■□□□ 1.24
NEO1-202ENST00000339362 NEUROD1Q13562 356 aa22.78■■□□□ 1.24
NEO1-202ENST00000339362 NEFMP07197 916 aa22.77■■□□□ 1.24
NEO1-202ENST00000339362 FAM50AQ14320 339 aaKnown RBP22.7■■□□□ 1.22
NEO1-202ENST00000339362 GTF3C3Q9Y5Q9 886 aa22.67■■□□□ 1.22
NEO1-202ENST00000339362 ANP32CO43423 234 aa22.62■■□□□ 1.21
NEO1-202ENST00000339362 TULP1O00294 542 aaPredicted RBP22.56■■□□□ 1.2
NEO1-202ENST00000339362 NBR1Q14596 966 aa22.49■■□□□ 1.19
NEO1-202ENST00000339362 ABCC9O60706 1549 aa22.45■■□□□ 1.18
NEO1-202ENST00000339362 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
NEO1-202ENST00000339362 UPF2Q9HAU5 1272 aaKnown RBP22.42■■□□□ 1.18
NEO1-202ENST00000339362 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
NEO1-202ENST00000339362 NCBP3Q53F19 620 aaKnown RBP22.39■■□□□ 1.17
NEO1-202ENST00000339362 A0A0G2JS52 829 aa22.37■■□□□ 1.17
NEO1-202ENST00000339362 AMER1Q5JTC6 1135 aaPredicted RBP22.27■■□□□ 1.16
NEO1-202ENST00000339362 TNNT2P45379 298 aaPredicted RBP22.25■■□□□ 1.15
NEO1-202ENST00000339362 TPRNQ4KMQ1 711 aa22.22■■□□□ 1.15
NEO1-202ENST00000339362 SCAF1Q9H7N4 1312 aaKnown RBP22.22■■□□□ 1.15
NEO1-202ENST00000339362 SALL2Q9Y467 1007 aaPredicted RBP22.22■■□□□ 1.15
NEO1-202ENST00000339362 FKBP8Q14318 412 aa22.12■■□□□ 1.13
NEO1-202ENST00000339362 TRIM44Q96DX7 344 aaPredicted RBP22.11■■□□□ 1.13
NEO1-202ENST00000339362 PLEKHG5O94827 1062 aa22.08■■□□□ 1.13
NEO1-202ENST00000339362 DNTTIP2Q5QJE6 756 aaKnown RBP22.08■■□□□ 1.12
NEO1-202ENST00000339362 CSRNP3Q8WYN3 585 aa22.08■■□□□ 1.12
NEO1-202ENST00000339362 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
NEO1-202ENST00000339362 TAOK2Q9UL54 1235 aa22.05■■□□□ 1.12
NEO1-202ENST00000339362 STAG3Q9UJ98 1225 aa22.04■■□□□ 1.12
NEO1-202ENST00000339362 CHGAP10645 457 aaKnown RBP22.03■■□□□ 1.12
NEO1-202ENST00000339362 NCLP19338 710 aaKnown RBP22.03■■□□□ 1.12
NEO1-202ENST00000339362 ESF1Q9H501 851 aaKnown RBP22.02■■□□□ 1.12
NEO1-202ENST00000339362 PTMAP06454 111 aaKnown RBP22.02■■□□□ 1.11
NEO1-202ENST00000339362 FBLN2P98095 1184 aa22.01■■□□□ 1.11
NEO1-202ENST00000339362 ZBTB7CA1YPR0 619 aa21.98■■□□□ 1.11
NEO1-202ENST00000339362 ZRSR1Q15695 479 aaKnown RBP21.98■■□□□ 1.11
NEO1-202ENST00000339362 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
NEO1-202ENST00000339362 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
NEO1-202ENST00000339362 FAM9BQ8IZU0 186 aa21.94■■□□□ 1.1
NEO1-202ENST00000339362 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.94■■□□□ 1.1
NEO1-202ENST00000339362 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
NEO1-202ENST00000339362 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
NEO1-202ENST00000339362 CCDC136Q96JN2 1154 aa21.89■■□□□ 1.09
NEO1-202ENST00000339362 SCRIBQ14160 1630 aa21.89■■□□□ 1.09
NEO1-202ENST00000339362 MYH16Q9H6N6 1097 aa21.88■■□□□ 1.09
NEO1-202ENST00000339362 CLSTN1O94985 981 aa21.86■■□□□ 1.09
NEO1-202ENST00000339362 NAP1L5Q96NT1 182 aaPredicted RBP21.86■■□□□ 1.09
NEO1-202ENST00000339362 HNRNPUQ00839 825 aaKnown RBP eCLIP21.85■■□□□ 1.09
NEO1-202ENST00000339362 ZNF777Q9ULD5 760 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms