Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
C3orf56Q8N813 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.19■□□□□ 0.98
C3orf56Q8N813 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
C3orf56Q8N813 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
C3orf56Q8N813 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C3orf56Q8N813 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
C3orf56Q8N813 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C3orf56Q8N813 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.15■□□□□ 0.98
C3orf56Q8N813 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C3orf56Q8N813 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.15■□□□□ 0.98
C3orf56Q8N813 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.15■□□□□ 0.98
C3orf56Q8N813 MIR6090-201ENST00000622481 60 ntBASIC21.15■□□□□ 0.98
C3orf56Q8N813 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
C3orf56Q8N813 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
C3orf56Q8N813 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C3orf56Q8N813 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C3orf56Q8N813 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C3orf56Q8N813 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
C3orf56Q8N813 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C3orf56Q8N813 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.1■□□□□ 0.97
C3orf56Q8N813 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C3orf56Q8N813 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
C3orf56Q8N813 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C3orf56Q8N813 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C3orf56Q8N813 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.09■□□□□ 0.97
C3orf56Q8N813 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C3orf56Q8N813 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C3orf56Q8N813 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
C3orf56Q8N813 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
C3orf56Q8N813 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
C3orf56Q8N813 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
C3orf56Q8N813 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C3orf56Q8N813 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.07■□□□□ 0.96
C3orf56Q8N813 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.05■□□□□ 0.96
C3orf56Q8N813 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C3orf56Q8N813 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C3orf56Q8N813 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C3orf56Q8N813 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C3orf56Q8N813 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
C3orf56Q8N813 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C3orf56Q8N813 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
C3orf56Q8N813 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
C3orf56Q8N813 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.01■□□□□ 0.95
C3orf56Q8N813 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.01■□□□□ 0.95
C3orf56Q8N813 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21■□□□□ 0.95
C3orf56Q8N813 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21■□□□□ 0.95
C3orf56Q8N813 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
C3orf56Q8N813 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
C3orf56Q8N813 RARRES2P2-201ENST00000394842 485 ntBASIC20.99■□□□□ 0.95
C3orf56Q8N813 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.99■□□□□ 0.95
C3orf56Q8N813 ABHD17AP5-201ENST00000580133 923 ntBASIC20.99■□□□□ 0.95
C3orf56Q8N813 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C3orf56Q8N813 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C3orf56Q8N813 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C3orf56Q8N813 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C3orf56Q8N813 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C3orf56Q8N813 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C3orf56Q8N813 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C3orf56Q8N813 DUX4L13-201ENST00000554103 1267 ntBASIC20.96■□□□□ 0.95
C3orf56Q8N813 DUX4L15-201ENST00000611059 1267 ntBASIC20.96■□□□□ 0.95
C3orf56Q8N813 DUX4L23-201ENST00000615195 1269 ntBASIC20.96■□□□□ 0.95
C3orf56Q8N813 DUX4L24-201ENST00000617576 1269 ntBASIC20.96■□□□□ 0.95
C3orf56Q8N813 DUX4L22-201ENST00000618238 1269 ntBASIC20.96■□□□□ 0.95
C3orf56Q8N813 DUX4L20-201ENST00000619712 1269 ntBASIC20.96■□□□□ 0.95
C3orf56Q8N813 DUX4L21-201ENST00000622058 1269 ntBASIC20.96■□□□□ 0.95
C3orf56Q8N813 DUX4L10-201ENST00000622460 1267 ntBASIC20.96■□□□□ 0.95
C3orf56Q8N813 DUX4L25-201ENST00000624915 1269 ntBASIC20.96■□□□□ 0.95
C3orf56Q8N813 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
C3orf56Q8N813 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
C3orf56Q8N813 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.95■□□□□ 0.94
C3orf56Q8N813 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
C3orf56Q8N813 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.94■□□□□ 0.94
C3orf56Q8N813 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.94■□□□□ 0.94
C3orf56Q8N813 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf56Q8N813 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf56Q8N813 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf56Q8N813 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf56Q8N813 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf56Q8N813 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf56Q8N813 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf56Q8N813 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf56Q8N813 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
C3orf56Q8N813 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.91■□□□□ 0.94
C3orf56Q8N813 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C3orf56Q8N813 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C3orf56Q8N813 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C3orf56Q8N813 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C3orf56Q8N813 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
C3orf56Q8N813 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
C3orf56Q8N813 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C3orf56Q8N813 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.89■□□□□ 0.93
C3orf56Q8N813 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.89■□□□□ 0.93
C3orf56Q8N813 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
C3orf56Q8N813 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C3orf56Q8N813 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.88■□□□□ 0.93
C3orf56Q8N813 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.88■□□□□ 0.93
C3orf56Q8N813 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.88■□□□□ 0.93
C3orf56Q8N813 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C3orf56Q8N813 GPX1-201ENST00000419349 1106 ntBASIC20.87■□□□□ 0.93
C3orf56Q8N813 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms