Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.77■□□□□ 0.92
NDUFA11Q86Y39 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.77■□□□□ 0.92
NDUFA11Q86Y39 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
NDUFA11Q86Y39 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFA11Q86Y39 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.76■□□□□ 0.91
NDUFA11Q86Y39 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NDUFA11Q86Y39 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NDUFA11Q86Y39 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA11Q86Y39 AC021231.2-201ENST00000594613 730 ntBASIC20.75■□□□□ 0.91
NDUFA11Q86Y39 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NDUFA11Q86Y39 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA11Q86Y39 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFA11Q86Y39 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFA11Q86Y39 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFA11Q86Y39 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFA11Q86Y39 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
NDUFA11Q86Y39 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA11Q86Y39 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA11Q86Y39 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA11Q86Y39 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA11Q86Y39 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NDUFA11Q86Y39 MIR6090-201ENST00000622481 60 ntBASIC20.7■□□□□ 0.9
NDUFA11Q86Y39 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA11Q86Y39 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFA11Q86Y39 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.68■□□□□ 0.9
NDUFA11Q86Y39 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFA11Q86Y39 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFA11Q86Y39 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.68■□□□□ 0.9
NDUFA11Q86Y39 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFA11Q86Y39 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFA11Q86Y39 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.66■□□□□ 0.9
NDUFA11Q86Y39 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.66■□□□□ 0.9
NDUFA11Q86Y39 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFA11Q86Y39 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.65■□□□□ 0.9
NDUFA11Q86Y39 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA11Q86Y39 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA11Q86Y39 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA11Q86Y39 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA11Q86Y39 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
NDUFA11Q86Y39 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFA11Q86Y39 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFA11Q86Y39 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFA11Q86Y39 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 LINC01971-201ENST00000617888 1048 ntBASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NDUFA11Q86Y39 MIR639-201ENST00000384974 98 ntBASIC20.59■□□□□ 0.89
NDUFA11Q86Y39 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFA11Q86Y39 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.58■□□□□ 0.89
NDUFA11Q86Y39 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFA11Q86Y39 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NDUFA11Q86Y39 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFA11Q86Y39 AC120057.4-201ENST00000624722 1615 ntBASIC20.57■□□□□ 0.88
NDUFA11Q86Y39 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.57■□□□□ 0.88
NDUFA11Q86Y39 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.57■□□□□ 0.88
NDUFA11Q86Y39 MIR4449-201ENST00000578365 66 ntBASIC20.57■□□□□ 0.88
NDUFA11Q86Y39 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NDUFA11Q86Y39 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFA11Q86Y39 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.56■□□□□ 0.88
NDUFA11Q86Y39 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFA11Q86Y39 MIR3648-2-201ENST00000581792 180 ntBASIC20.55■□□□□ 0.88
NDUFA11Q86Y39 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFA11Q86Y39 MIR3648-1-201ENST00000615959 180 ntBASIC20.55■□□□□ 0.88
NDUFA11Q86Y39 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 DUX4L11-201ENST00000611504 1267 ntBASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 DUX4L12-201ENST00000614593 1267 ntBASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 DUX4L14-201ENST00000621227 1267 ntBASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NDUFA11Q86Y39 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.52■□□□□ 0.88
NDUFA11Q86Y39 AC016575.1-201ENST00000607026 382 ntBASIC20.52■□□□□ 0.88
NDUFA11Q86Y39 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NDUFA11Q86Y39 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDUFA11Q86Y39 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms