Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB5BP61020 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB5BP61020 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.13■□□□□ 0.97
RAB5BP61020 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB5BP61020 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB5BP61020 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB5BP61020 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB5BP61020 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB5BP61020 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB5BP61020 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
RAB5BP61020 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.09■□□□□ 0.97
RAB5BP61020 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB5BP61020 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RAB5BP61020 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB5BP61020 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.08■□□□□ 0.96
RAB5BP61020 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAB5BP61020 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAB5BP61020 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.07■□□□□ 0.96
RAB5BP61020 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.07■□□□□ 0.96
RAB5BP61020 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.06■□□□□ 0.96
RAB5BP61020 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB5BP61020 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB5BP61020 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB5BP61020 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.05■□□□□ 0.96
RAB5BP61020 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RAB5BP61020 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RAB5BP61020 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.05■□□□□ 0.96
RAB5BP61020 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB5BP61020 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RAB5BP61020 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.04■□□□□ 0.96
RAB5BP61020 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB5BP61020 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RAB5BP61020 AL121749.1-202ENST00000609313 2153 ntBASIC21.03■□□□□ 0.96
RAB5BP61020 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB5BP61020 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAB5BP61020 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB5BP61020 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.03■□□□□ 0.96
RAB5BP61020 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RAB5BP61020 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.01■□□□□ 0.95
RAB5BP61020 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB5BP61020 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RAB5BP61020 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB5BP61020 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB5BP61020 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RAB5BP61020 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RAB5BP61020 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB5BP61020 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB5BP61020 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
RAB5BP61020 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB5BP61020 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RAB5BP61020 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB5BP61020 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB5BP61020 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB5BP61020 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB5BP61020 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB5BP61020 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB5BP61020 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB5BP61020 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB5BP61020 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB5BP61020 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RAB5BP61020 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB5BP61020 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB5BP61020 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RAB5BP61020 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
RAB5BP61020 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB5BP61020 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB5BP61020 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.93■□□□□ 0.94
RAB5BP61020 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB5BP61020 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB5BP61020 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB5BP61020 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB5BP61020 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB5BP61020 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB5BP61020 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.9■□□□□ 0.94
RAB5BP61020 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB5BP61020 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB5BP61020 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB5BP61020 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAB5BP61020 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB5BP61020 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAB5BP61020 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.89■□□□□ 0.94
RAB5BP61020 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB5BP61020 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB5BP61020 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB5BP61020 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB5BP61020 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB5BP61020 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RAB5BP61020 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB5BP61020 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RAB5BP61020 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RAB5BP61020 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB5BP61020 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB5BP61020 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB5BP61020 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB5BP61020 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB5BP61020 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RAB5BP61020 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RAB5BP61020 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB5BP61020 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.83■□□□□ 0.93
RAB5BP61020 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms