Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.64■■■□□ 2.66
LBX1P52954 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.64■■■□□ 2.66
LBX1P52954 AC012354.3-201ENST00000623734 483 ntBASIC31.64■■■□□ 2.66
LBX1P52954 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
LBX1P52954 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
LBX1P52954 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
LBX1P52954 WASH5P-204ENST00000632292 975 ntBASIC31.63■■■□□ 2.65
LBX1P52954 AC108673.1-201ENST00000510422 1159 ntBASIC31.62■■■□□ 2.65
LBX1P52954 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.61■■■□□ 2.65
LBX1P52954 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
LBX1P52954 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.61■■■□□ 2.65
LBX1P52954 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
LBX1P52954 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.61■■■□□ 2.65
LBX1P52954 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
LBX1P52954 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.61■■■□□ 2.65
LBX1P52954 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
LBX1P52954 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
LBX1P52954 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
LBX1P52954 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
LBX1P52954 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
LBX1P52954 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.59■■■□□ 2.65
LBX1P52954 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.58■■■□□ 2.65
LBX1P52954 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
LBX1P52954 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
LBX1P52954 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
LBX1P52954 GPX1-201ENST00000419349 1106 ntBASIC31.56■■■□□ 2.64
LBX1P52954 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
LBX1P52954 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
LBX1P52954 RNF126P1-201ENST00000567452 1320 ntBASIC31.54■■■□□ 2.64
LBX1P52954 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.54■■■□□ 2.64
LBX1P52954 AC018358.1-201ENST00000631079 1402 ntBASIC31.53■■■□□ 2.64
LBX1P52954 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.53■■■□□ 2.64
LBX1P52954 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
LBX1P52954 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
LBX1P52954 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
LBX1P52954 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
LBX1P52954 NTF6A-201ENST00000591175 560 ntBASIC31.51■■■□□ 2.63
LBX1P52954 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LBX1P52954 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LBX1P52954 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LBX1P52954 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LBX1P52954 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LBX1P52954 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
LBX1P52954 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.5■■■□□ 2.63
LBX1P52954 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
LBX1P52954 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
LBX1P52954 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.49■■■□□ 2.63
LBX1P52954 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.48■■■□□ 2.63
LBX1P52954 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
LBX1P52954 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
LBX1P52954 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
LBX1P52954 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LBX1P52954 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
LBX1P52954 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LBX1P52954 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.45■■■□□ 2.63
LBX1P52954 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.45■■■□□ 2.63
LBX1P52954 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
LBX1P52954 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
LBX1P52954 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.43■■■□□ 2.62
LBX1P52954 DUX4L13-201ENST00000554103 1267 ntBASIC31.42■■■□□ 2.62
LBX1P52954 DUX4L15-201ENST00000611059 1267 ntBASIC31.42■■■□□ 2.62
LBX1P52954 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.42■■■□□ 2.62
LBX1P52954 DUX4L23-201ENST00000615195 1269 ntBASIC31.42■■■□□ 2.62
LBX1P52954 DUX4L24-201ENST00000617576 1269 ntBASIC31.42■■■□□ 2.62
LBX1P52954 DUX4L22-201ENST00000618238 1269 ntBASIC31.42■■■□□ 2.62
LBX1P52954 DUX4L20-201ENST00000619712 1269 ntBASIC31.42■■■□□ 2.62
LBX1P52954 DUX4L21-201ENST00000622058 1269 ntBASIC31.42■■■□□ 2.62
LBX1P52954 DUX4L10-201ENST00000622460 1267 ntBASIC31.42■■■□□ 2.62
LBX1P52954 DUX4L25-201ENST00000624915 1269 ntBASIC31.42■■■□□ 2.62
LBX1P52954 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
LBX1P52954 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.4■■■□□ 2.62
LBX1P52954 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.4■■■□□ 2.62
LBX1P52954 AC019069.1-201ENST00000610008 1333 ntBASIC31.4■■■□□ 2.62
LBX1P52954 AL033527.3-201ENST00000566366 1196 ntBASIC31.39■■■□□ 2.62
LBX1P52954 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
LBX1P52954 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
LBX1P52954 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.37■■■□□ 2.61
LBX1P52954 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.37■■■□□ 2.61
LBX1P52954 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
LBX1P52954 AC008813.1-201ENST00000536597 885 ntBASIC31.35■■■□□ 2.61
LBX1P52954 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LBX1P52954 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.33■■■□□ 2.61
LBX1P52954 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.32■■■□□ 2.6
LBX1P52954 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
LBX1P52954 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
LBX1P52954 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
LBX1P52954 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LBX1P52954 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.31■■■□□ 2.6
LBX1P52954 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
LBX1P52954 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LBX1P52954 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
LBX1P52954 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
LBX1P52954 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LBX1P52954 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
LBX1P52954 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.27■■■□□ 2.6
LBX1P52954 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
LBX1P52954 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
LBX1P52954 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LBX1P52954 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LBX1P52954 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms