Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.32■■□□□ 1
PCP4L1A6NKN8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCP4L1A6NKN8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.3■■□□□ 1
PCP4L1A6NKN8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCP4L1A6NKN8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCP4L1A6NKN8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCP4L1A6NKN8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCP4L1A6NKN8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCP4L1A6NKN8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCP4L1A6NKN8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.26■□□□□ 0.99
PCP4L1A6NKN8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCP4L1A6NKN8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCP4L1A6NKN8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCP4L1A6NKN8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCP4L1A6NKN8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.24■□□□□ 0.99
PCP4L1A6NKN8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCP4L1A6NKN8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PCP4L1A6NKN8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCP4L1A6NKN8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCP4L1A6NKN8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCP4L1A6NKN8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCP4L1A6NKN8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCP4L1A6NKN8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCP4L1A6NKN8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCP4L1A6NKN8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCP4L1A6NKN8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
PCP4L1A6NKN8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCP4L1A6NKN8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCP4L1A6NKN8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCP4L1A6NKN8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCP4L1A6NKN8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCP4L1A6NKN8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCP4L1A6NKN8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCP4L1A6NKN8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCP4L1A6NKN8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCP4L1A6NKN8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCP4L1A6NKN8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PCP4L1A6NKN8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCP4L1A6NKN8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCP4L1A6NKN8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCP4L1A6NKN8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCP4L1A6NKN8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCP4L1A6NKN8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
PCP4L1A6NKN8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PCP4L1A6NKN8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCP4L1A6NKN8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCP4L1A6NKN8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCP4L1A6NKN8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCP4L1A6NKN8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PCP4L1A6NKN8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCP4L1A6NKN8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PCP4L1A6NKN8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCP4L1A6NKN8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
PCP4L1A6NKN8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCP4L1A6NKN8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
PCP4L1A6NKN8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCP4L1A6NKN8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.08■□□□□ 0.97
PCP4L1A6NKN8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.07■□□□□ 0.96
PCP4L1A6NKN8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCP4L1A6NKN8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.07■□□□□ 0.96
PCP4L1A6NKN8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCP4L1A6NKN8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCP4L1A6NKN8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.06■□□□□ 0.96
PCP4L1A6NKN8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCP4L1A6NKN8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCP4L1A6NKN8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCP4L1A6NKN8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCP4L1A6NKN8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCP4L1A6NKN8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
PCP4L1A6NKN8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PCP4L1A6NKN8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCP4L1A6NKN8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCP4L1A6NKN8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCP4L1A6NKN8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
PCP4L1A6NKN8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
PCP4L1A6NKN8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.02■□□□□ 0.96
PCP4L1A6NKN8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCP4L1A6NKN8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCP4L1A6NKN8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.01■□□□□ 0.95
PCP4L1A6NKN8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCP4L1A6NKN8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCP4L1A6NKN8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCP4L1A6NKN8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCP4L1A6NKN8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PCP4L1A6NKN8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCP4L1A6NKN8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCP4L1A6NKN8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21■□□□□ 0.95
PCP4L1A6NKN8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21■□□□□ 0.95
PCP4L1A6NKN8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.99■□□□□ 0.95
PCP4L1A6NKN8 AL356512.1-201ENST00000607453 1739 ntBASIC20.99■□□□□ 0.95
PCP4L1A6NKN8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.99■□□□□ 0.95
PCP4L1A6NKN8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCP4L1A6NKN8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCP4L1A6NKN8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCP4L1A6NKN8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCP4L1A6NKN8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCP4L1A6NKN8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCP4L1A6NKN8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PCP4L1A6NKN8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCP4L1A6NKN8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms