Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC85CA6NKD9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC85CA6NKD9 GPX1-201ENST00000419349 1106 ntBASIC31.08■■■□□ 2.57
CCDC85CA6NKD9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.07■■■□□ 2.57
CCDC85CA6NKD9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
CCDC85CA6NKD9 NTF6A-201ENST00000591175 560 ntBASIC31.07■■■□□ 2.56
CCDC85CA6NKD9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
CCDC85CA6NKD9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.06■■■□□ 2.56
CCDC85CA6NKD9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CCDC85CA6NKD9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC85CA6NKD9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.06■■■□□ 2.56
CCDC85CA6NKD9 RNF126P1-201ENST00000567452 1320 ntBASIC31.05■■■□□ 2.56
CCDC85CA6NKD9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC85CA6NKD9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC85CA6NKD9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CCDC85CA6NKD9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
CCDC85CA6NKD9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31■■■□□ 2.55
CCDC85CA6NKD9 AL033527.3-201ENST00000566366 1196 ntBASIC31■■■□□ 2.55
CCDC85CA6NKD9 MIR6090-201ENST00000622481 60 ntBASIC31■■■□□ 2.55
CCDC85CA6NKD9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 AC108673.1-201ENST00000510422 1159 ntBASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC85CA6NKD9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC30.98■■■□□ 2.55
CCDC85CA6NKD9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC85CA6NKD9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC85CA6NKD9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.97■■■□□ 2.55
CCDC85CA6NKD9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC85CA6NKD9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.96■■■□□ 2.55
CCDC85CA6NKD9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC85CA6NKD9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC85CA6NKD9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC85CA6NKD9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.94■■■□□ 2.54
CCDC85CA6NKD9 AC008813.1-201ENST00000536597 885 ntBASIC30.94■■■□□ 2.54
CCDC85CA6NKD9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.94■■■□□ 2.54
CCDC85CA6NKD9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC85CA6NKD9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC85CA6NKD9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC85CA6NKD9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC85CA6NKD9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC85CA6NKD9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC85CA6NKD9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC85CA6NKD9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
CCDC85CA6NKD9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
CCDC85CA6NKD9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC85CA6NKD9 AL592295.1-201ENST00000400984 884 ntBASIC30.9■■■□□ 2.54
CCDC85CA6NKD9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC85CA6NKD9 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.87■■■□□ 2.53
CCDC85CA6NKD9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC85CA6NKD9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.86■■■□□ 2.53
CCDC85CA6NKD9 WASH5P-204ENST00000632292 975 ntBASIC30.86■■■□□ 2.53
CCDC85CA6NKD9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC85CA6NKD9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.85■■■□□ 2.53
CCDC85CA6NKD9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.84■■■□□ 2.53
CCDC85CA6NKD9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.84■■■□□ 2.53
CCDC85CA6NKD9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 DUX4L13-201ENST00000554103 1267 ntBASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 DUX4L15-201ENST00000611059 1267 ntBASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 DUX4L23-201ENST00000615195 1269 ntBASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 DUX4L24-201ENST00000617576 1269 ntBASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 DUX4L22-201ENST00000618238 1269 ntBASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 DUX4L20-201ENST00000619712 1269 ntBASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 DUX4L21-201ENST00000622058 1269 ntBASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 DUX4L10-201ENST00000622460 1267 ntBASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 DUX4L25-201ENST00000624915 1269 ntBASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC85CA6NKD9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
CCDC85CA6NKD9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC85CA6NKD9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.81■■■□□ 2.52
CCDC85CA6NKD9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC85CA6NKD9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.8■■■□□ 2.52
CCDC85CA6NKD9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.8■■■□□ 2.52
CCDC85CA6NKD9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC85CA6NKD9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC85CA6NKD9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
CCDC85CA6NKD9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC85CA6NKD9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC85CA6NKD9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.77■■■□□ 2.52
CCDC85CA6NKD9 RARRES2P1-201ENST00000474487 481 ntBASIC30.75■■■□□ 2.51
CCDC85CA6NKD9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC85CA6NKD9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.74■■■□□ 2.51
CCDC85CA6NKD9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC85CA6NKD9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC85CA6NKD9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.72■■■□□ 2.51
CCDC85CA6NKD9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.71■■■□□ 2.51
CCDC85CA6NKD9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC85CA6NKD9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC85CA6NKD9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.67■■■□□ 2.5
CCDC85CA6NKD9 MIR935-201ENST00000401179 91 ntBASIC30.66■■■□□ 2.5
CCDC85CA6NKD9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms