Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 EEF1DP3-203ENST00000566025 782 ntBASIC20.28■□□□□ 0.84
KRT78Q8N1N4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 AC053503.5-201ENST00000601508 636 ntBASIC20.28■□□□□ 0.84
KRT78Q8N1N4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 KRT87P-202ENST00000534226 1464 ntBASIC20.28■□□□□ 0.84
KRT78Q8N1N4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 AC026310.3-201ENST00000625186 2373 ntBASIC20.28■□□□□ 0.84
KRT78Q8N1N4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT78Q8N1N4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT78Q8N1N4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
KRT78Q8N1N4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
KRT78Q8N1N4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT78Q8N1N4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT78Q8N1N4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT78Q8N1N4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.27■□□□□ 0.84
KRT78Q8N1N4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT78Q8N1N4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
KRT78Q8N1N4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KRT78Q8N1N4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT78Q8N1N4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.27■□□□□ 0.83
KRT78Q8N1N4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.27■□□□□ 0.83
KRT78Q8N1N4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 AC007375.3-201ENST00000600936 2314 ntBASIC20.26■□□□□ 0.83
KRT78Q8N1N4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT78Q8N1N4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 TERF1P2-201ENST00000583350 1212 ntBASIC20.25■□□□□ 0.83
KRT78Q8N1N4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT78Q8N1N4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 CCDC92B-201ENST00000575506 885 ntBASIC20.24■□□□□ 0.83
KRT78Q8N1N4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT78Q8N1N4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 KRT18P14-201ENST00000534205 1250 ntBASIC20.23■□□□□ 0.83
KRT78Q8N1N4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KRT78Q8N1N4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms