Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCL2P13500 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCL2P13500 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL2P13500 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCL2P13500 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL2P13500 Z98882.1-201ENST00000622160 2253 ntBASIC18.34■□□□□ 0.53
CCL2P13500 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCL2P13500 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL2P13500 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL2P13500 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL2P13500 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL2P13500 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCL2P13500 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL2P13500 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCL2P13500 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.33■□□□□ 0.53
CCL2P13500 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
CCL2P13500 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCL2P13500 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL2P13500 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.33■□□□□ 0.52
CCL2P13500 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.33■□□□□ 0.52
CCL2P13500 EEF1DP3-203ENST00000566025 782 ntBASIC18.33■□□□□ 0.52
CCL2P13500 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.33■□□□□ 0.52
CCL2P13500 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCL2P13500 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL2P13500 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.33■□□□□ 0.52
CCL2P13500 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL2P13500 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL2P13500 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL2P13500 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCL2P13500 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL2P13500 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL2P13500 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL2P13500 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL2P13500 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL2P13500 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL2P13500 AC053503.5-201ENST00000601508 636 ntBASIC18.32■□□□□ 0.52
CCL2P13500 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL2P13500 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL2P13500 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL2P13500 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL2P13500 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL2P13500 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL2P13500 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCL2P13500 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL2P13500 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL2P13500 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL2P13500 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL2P13500 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL2P13500 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCL2P13500 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CCL2P13500 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL2P13500 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL2P13500 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.31■□□□□ 0.52
CCL2P13500 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL2P13500 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.31■□□□□ 0.52
CCL2P13500 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL2P13500 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL2P13500 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCL2P13500 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL2P13500 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCL2P13500 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL2P13500 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCL2P13500 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.3■□□□□ 0.52
CCL2P13500 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.3■□□□□ 0.52
CCL2P13500 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL2P13500 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCL2P13500 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL2P13500 AC026310.3-201ENST00000625186 2373 ntBASIC18.3■□□□□ 0.52
CCL2P13500 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL2P13500 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL2P13500 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL2P13500 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.29■□□□□ 0.52
CCL2P13500 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.29■□□□□ 0.52
CCL2P13500 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL2P13500 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCL2P13500 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL2P13500 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL2P13500 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.29■□□□□ 0.52
CCL2P13500 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL2P13500 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL2P13500 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCL2P13500 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCL2P13500 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL2P13500 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL2P13500 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CCL2P13500 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CCL2P13500 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms