Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LDB2O43679 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LDB2O43679 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.05■□□□□ 0.96
LDB2O43679 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.05■□□□□ 0.96
LDB2O43679 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
LDB2O43679 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.05■□□□□ 0.96
LDB2O43679 AL049796.1-201ENST00000565336 1766 ntBASIC21.05■□□□□ 0.96
LDB2O43679 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LDB2O43679 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.04■□□□□ 0.96
LDB2O43679 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.04■□□□□ 0.96
LDB2O43679 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LDB2O43679 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LDB2O43679 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.04■□□□□ 0.96
LDB2O43679 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LDB2O43679 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.04■□□□□ 0.96
LDB2O43679 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.04■□□□□ 0.96
LDB2O43679 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.04■□□□□ 0.96
LDB2O43679 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.04■□□□□ 0.96
LDB2O43679 AC138907.5-202ENST00000569484 235 ntBASIC21.04■□□□□ 0.96
LDB2O43679 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.04■□□□□ 0.96
LDB2O43679 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LDB2O43679 AC061975.6-201ENST00000579045 1553 ntBASIC21.04■□□□□ 0.96
LDB2O43679 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LDB2O43679 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LDB2O43679 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.04■□□□□ 0.96
LDB2O43679 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.04■□□□□ 0.96
LDB2O43679 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.04■□□□□ 0.96
LDB2O43679 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LDB2O43679 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LDB2O43679 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LDB2O43679 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LDB2O43679 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDB2O43679 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.03■□□□□ 0.96
LDB2O43679 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDB2O43679 AC097381.1-201ENST00000429019 1296 ntBASIC21.03■□□□□ 0.96
LDB2O43679 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.03■□□□□ 0.96
LDB2O43679 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDB2O43679 DUX4L2-201ENST00000561772 1275 ntBASIC21.03■□□□□ 0.96
LDB2O43679 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
LDB2O43679 DUX4L6-201ENST00000626483 1275 ntBASIC21.03■□□□□ 0.96
LDB2O43679 DUX4L1-201ENST00000627662 1275 ntBASIC21.03■□□□□ 0.96
LDB2O43679 DUX4L8-201ENST00000629013 1275 ntBASIC21.03■□□□□ 0.96
LDB2O43679 DUX4L3-201ENST00000630187 1275 ntBASIC21.03■□□□□ 0.96
LDB2O43679 DUX4L7-201ENST00000630678 1275 ntBASIC21.03■□□□□ 0.96
LDB2O43679 DUX4L5-201ENST00000630834 1275 ntBASIC21.03■□□□□ 0.96
LDB2O43679 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
LDB2O43679 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDB2O43679 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LDB2O43679 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LDB2O43679 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.02■□□□□ 0.96
LDB2O43679 AP004607.4-201ENST00000530158 1459 ntBASIC21.02■□□□□ 0.96
LDB2O43679 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LDB2O43679 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LDB2O43679 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LDB2O43679 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.02■□□□□ 0.96
LDB2O43679 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.02■□□□□ 0.96
LDB2O43679 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.02■□□□□ 0.96
LDB2O43679 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.02■□□□□ 0.96
LDB2O43679 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LDB2O43679 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LDB2O43679 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LDB2O43679 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LDB2O43679 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB2O43679 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB2O43679 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB2O43679 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LDB2O43679 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LDB2O43679 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB2O43679 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.01■□□□□ 0.95
LDB2O43679 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.01■□□□□ 0.95
LDB2O43679 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LDB2O43679 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.01■□□□□ 0.95
LDB2O43679 KRT18P61-201ENST00000585825 1298 ntBASIC21.01■□□□□ 0.95
LDB2O43679 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.01■□□□□ 0.95
LDB2O43679 AC104187.1-201ENST00000607510 612 ntBASIC21.01■□□□□ 0.95
LDB2O43679 MIR6821-201ENST00000617625 74 ntBASIC21.01■□□□□ 0.95
LDB2O43679 AC004854.2-201ENST00000608450 1441 ntBASIC21.01■□□□□ 0.95
LDB2O43679 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LDB2O43679 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB2O43679 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21■□□□□ 0.95
LDB2O43679 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21■□□□□ 0.95
LDB2O43679 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB2O43679 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB2O43679 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB2O43679 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21■□□□□ 0.95
LDB2O43679 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21■□□□□ 0.95
LDB2O43679 MIR5787-201ENST00000611784 55 ntBASIC21■□□□□ 0.95
LDB2O43679 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21■□□□□ 0.95
LDB2O43679 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LDB2O43679 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB2O43679 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
LDB2O43679 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB2O43679 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDB2O43679 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDB2O43679 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDB2O43679 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDB2O43679 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDB2O43679 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.99■□□□□ 0.95
LDB2O43679 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.99■□□□□ 0.95
LDB2O43679 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms