Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 TERF1P2-201ENST00000583350 1212 ntBASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV23-1A0A0A0MS06 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 AC055733.4-201ENST00000638462 1354 ntBASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.66■□□□□ 0.42
TRBV23-1A0A0A0MS06 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 RARRES2P6-201ENST00000567333 442 ntBASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV23-1A0A0A0MS06 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
TRBV23-1A0A0A0MS06 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV23-1A0A0A0MS06 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV23-1A0A0A0MS06 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms