Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 MIR4767-201ENST00000582827 78 ntBASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.74■□□□□ 0.75
TRBV5-3A0A0A0MS03 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 AC233992.3-201ENST00000607491 485 ntBASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 AC009237.3-201ENST00000393279 1427 ntBASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV5-3A0A0A0MS03 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 IGHV3-19-201ENST00000521488 291 ntBASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 AC121338.2-201ENST00000622535 1744 ntBASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRBV5-3A0A0A0MS03 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 AC027702.1-201ENST00000563810 1770 ntBASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV5-3A0A0A0MS03 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV5-3A0A0A0MS03 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms