Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00474Q9P2X8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 AC005224.4-201ENST00000583262 1652 ntBASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00474Q9P2X8 AP006587.3-201ENST00000525742 1516 ntBASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 C11orf96-202ENST00000528572 1834 ntBASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00474Q9P2X8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms