Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
THSD1Q9NS62 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
THSD1Q9NS62 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
THSD1Q9NS62 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.53■□□□□ 0.88
THSD1Q9NS62 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.53■□□□□ 0.88
THSD1Q9NS62 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
THSD1Q9NS62 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
THSD1Q9NS62 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
THSD1Q9NS62 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
THSD1Q9NS62 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
THSD1Q9NS62 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THSD1Q9NS62 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.52■□□□□ 0.88
THSD1Q9NS62 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
THSD1Q9NS62 AP001160.3-201ENST00000601484 763 ntBASIC20.52■□□□□ 0.88
THSD1Q9NS62 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
THSD1Q9NS62 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
THSD1Q9NS62 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
THSD1Q9NS62 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
THSD1Q9NS62 AC007375.3-201ENST00000600936 2314 ntBASIC20.52■□□□□ 0.87
THSD1Q9NS62 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
THSD1Q9NS62 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
THSD1Q9NS62 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THSD1Q9NS62 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.51■□□□□ 0.87
THSD1Q9NS62 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
THSD1Q9NS62 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
THSD1Q9NS62 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
THSD1Q9NS62 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.5■□□□□ 0.87
THSD1Q9NS62 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
THSD1Q9NS62 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THSD1Q9NS62 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.5■□□□□ 0.87
THSD1Q9NS62 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
THSD1Q9NS62 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.5■□□□□ 0.87
THSD1Q9NS62 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.5■□□□□ 0.87
THSD1Q9NS62 AC105036.2-201ENST00000569468 176 ntBASIC20.5■□□□□ 0.87
THSD1Q9NS62 AC133552.2-202ENST00000575694 574 ntBASIC20.5■□□□□ 0.87
THSD1Q9NS62 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
THSD1Q9NS62 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
THSD1Q9NS62 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
THSD1Q9NS62 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
THSD1Q9NS62 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.49■□□□□ 0.87
THSD1Q9NS62 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THSD1Q9NS62 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
THSD1Q9NS62 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
THSD1Q9NS62 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.49■□□□□ 0.87
THSD1Q9NS62 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
THSD1Q9NS62 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.49■□□□□ 0.87
THSD1Q9NS62 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THSD1Q9NS62 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.49■□□□□ 0.87
THSD1Q9NS62 AC093827.2-201ENST00000512654 315 ntBASIC20.49■□□□□ 0.87
THSD1Q9NS62 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
THSD1Q9NS62 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
THSD1Q9NS62 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.48■□□□□ 0.87
THSD1Q9NS62 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
THSD1Q9NS62 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.48■□□□□ 0.87
THSD1Q9NS62 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.48■□□□□ 0.87
THSD1Q9NS62 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THSD1Q9NS62 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
THSD1Q9NS62 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
THSD1Q9NS62 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
THSD1Q9NS62 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THSD1Q9NS62 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
THSD1Q9NS62 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
THSD1Q9NS62 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
THSD1Q9NS62 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
THSD1Q9NS62 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
THSD1Q9NS62 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
THSD1Q9NS62 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.47■□□□□ 0.87
THSD1Q9NS62 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
THSD1Q9NS62 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
THSD1Q9NS62 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
THSD1Q9NS62 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.46■□□□□ 0.87
THSD1Q9NS62 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.46■□□□□ 0.87
THSD1Q9NS62 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
THSD1Q9NS62 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
THSD1Q9NS62 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THSD1Q9NS62 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THSD1Q9NS62 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.46■□□□□ 0.87
THSD1Q9NS62 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
THSD1Q9NS62 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.46■□□□□ 0.87
THSD1Q9NS62 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
THSD1Q9NS62 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
THSD1Q9NS62 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
THSD1Q9NS62 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.46■□□□□ 0.87
THSD1Q9NS62 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
THSD1Q9NS62 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
THSD1Q9NS62 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
THSD1Q9NS62 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
THSD1Q9NS62 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
THSD1Q9NS62 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THSD1Q9NS62 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
THSD1Q9NS62 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
THSD1Q9NS62 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
THSD1Q9NS62 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THSD1Q9NS62 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.45■□□□□ 0.86
THSD1Q9NS62 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THSD1Q9NS62 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
THSD1Q9NS62 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.45■□□□□ 0.86
THSD1Q9NS62 MIR4758-201ENST00000577688 71 ntBASIC20.45■□□□□ 0.86
THSD1Q9NS62 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.45■□□□□ 0.86
THSD1Q9NS62 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms