Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
ITM2AO43736 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITM2AO43736 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.67■□□□□ 0.9
ITM2AO43736 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITM2AO43736 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.67■□□□□ 0.9
ITM2AO43736 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ITM2AO43736 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
ITM2AO43736 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
ITM2AO43736 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITM2AO43736 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITM2AO43736 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITM2AO43736 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITM2AO43736 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITM2AO43736 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.66■□□□□ 0.9
ITM2AO43736 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.66■□□□□ 0.9
ITM2AO43736 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.66■□□□□ 0.9
ITM2AO43736 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.66■□□□□ 0.9
ITM2AO43736 AL356740.2-201ENST00000601559 647 ntBASIC20.66■□□□□ 0.9
ITM2AO43736 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.66■□□□□ 0.9
ITM2AO43736 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITM2AO43736 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITM2AO43736 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ITM2AO43736 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITM2AO43736 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.66■□□□□ 0.9
ITM2AO43736 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITM2AO43736 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.66■□□□□ 0.9
ITM2AO43736 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ITM2AO43736 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITM2AO43736 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITM2AO43736 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ITM2AO43736 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.65■□□□□ 0.9
ITM2AO43736 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ITM2AO43736 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ITM2AO43736 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITM2AO43736 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITM2AO43736 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.65■□□□□ 0.9
ITM2AO43736 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ITM2AO43736 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.65■□□□□ 0.9
ITM2AO43736 MIR3621-201ENST00000580529 85 ntBASIC20.65■□□□□ 0.9
ITM2AO43736 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ITM2AO43736 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.65■□□□□ 0.9
ITM2AO43736 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ITM2AO43736 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ITM2AO43736 AP006587.3-201ENST00000525742 1516 ntBASIC20.64■□□□□ 0.9
ITM2AO43736 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ITM2AO43736 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
ITM2AO43736 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITM2AO43736 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITM2AO43736 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITM2AO43736 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ITM2AO43736 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ITM2AO43736 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITM2AO43736 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.64■□□□□ 0.89
ITM2AO43736 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITM2AO43736 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITM2AO43736 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITM2AO43736 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ITM2AO43736 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.63■□□□□ 0.89
ITM2AO43736 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ITM2AO43736 PCDHAC2-203ENST00000615316 3011 ntBASIC20.63■□□□□ 0.89
ITM2AO43736 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ITM2AO43736 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITM2AO43736 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ITM2AO43736 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITM2AO43736 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITM2AO43736 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITM2AO43736 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ITM2AO43736 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ITM2AO43736 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.62■□□□□ 0.89
ITM2AO43736 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.62■□□□□ 0.89
ITM2AO43736 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.62■□□□□ 0.89
ITM2AO43736 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ITM2AO43736 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ITM2AO43736 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.62■□□□□ 0.89
ITM2AO43736 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.62■□□□□ 0.89
ITM2AO43736 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.62■□□□□ 0.89
ITM2AO43736 SRD5A1P1-201ENST00000442297 786 ntBASIC20.62■□□□□ 0.89
ITM2AO43736 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.62■□□□□ 0.89
ITM2AO43736 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.62■□□□□ 0.89
ITM2AO43736 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
ITM2AO43736 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.62■□□□□ 0.89
ITM2AO43736 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITM2AO43736 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.61■□□□□ 0.89
ITM2AO43736 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.61■□□□□ 0.89
ITM2AO43736 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITM2AO43736 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ITM2AO43736 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms