Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-3A0A0A0MS03 AC073314.1-201ENST00000568729 2216 ntBASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 BX842568.3-201ENST00000418104 571 ntBASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-3A0A0A0MS03 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-3A0A0A0MS03 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 AC055733.4-201ENST00000638462 1354 ntBASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TRBV5-3A0A0A0MS03 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TRBV5-3A0A0A0MS03 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRBV5-3A0A0A0MS03 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.77■□□□□ 0.75
TRBV5-3A0A0A0MS03 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRBV5-3A0A0A0MS03 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV5-3A0A0A0MS03 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.75■□□□□ 0.75
TRBV5-3A0A0A0MS03 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms