Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.33■□□□□ 0.85
DUX1O43812 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.33■□□□□ 0.85
DUX1O43812 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.33■□□□□ 0.85
DUX1O43812 AC008694.1-202ENST00000636953 945 ntBASIC20.33■□□□□ 0.85
DUX1O43812 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.33■□□□□ 0.84
DUX1O43812 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DUX1O43812 AC068338.2-201ENST00000563278 1430 ntBASIC20.33■□□□□ 0.84
DUX1O43812 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DUX1O43812 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DUX1O43812 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DUX1O43812 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DUX1O43812 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.32■□□□□ 0.84
DUX1O43812 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DUX1O43812 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DUX1O43812 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DUX1O43812 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DUX1O43812 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DUX1O43812 AC069236.1-201ENST00000604339 616 ntBASIC20.32■□□□□ 0.84
DUX1O43812 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.32■□□□□ 0.84
DUX1O43812 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DUX1O43812 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DUX1O43812 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DUX1O43812 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
DUX1O43812 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DUX1O43812 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.31■□□□□ 0.84
DUX1O43812 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DUX1O43812 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
DUX1O43812 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.31■□□□□ 0.84
DUX1O43812 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.31■□□□□ 0.84
DUX1O43812 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.31■□□□□ 0.84
DUX1O43812 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DUX1O43812 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.31■□□□□ 0.84
DUX1O43812 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
DUX1O43812 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.31■□□□□ 0.84
DUX1O43812 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DUX1O43812 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.3■□□□□ 0.84
DUX1O43812 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DUX1O43812 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.3■□□□□ 0.84
DUX1O43812 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DUX1O43812 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
DUX1O43812 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
DUX1O43812 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DUX1O43812 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DUX1O43812 C9orf163-202ENST00000624034 2573 ntBASIC20.3■□□□□ 0.84
DUX1O43812 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DUX1O43812 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.3■□□□□ 0.84
DUX1O43812 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DUX1O43812 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.3■□□□□ 0.84
DUX1O43812 AL138781.1-201ENST00000566567 1274 ntBASIC20.3■□□□□ 0.84
DUX1O43812 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.3■□□□□ 0.84
DUX1O43812 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.3■□□□□ 0.84
DUX1O43812 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DUX1O43812 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.3■□□□□ 0.84
DUX1O43812 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DUX1O43812 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
DUX1O43812 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.3■□□□□ 0.84
DUX1O43812 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.3■□□□□ 0.84
DUX1O43812 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DUX1O43812 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DUX1O43812 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DUX1O43812 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DUX1O43812 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.29■□□□□ 0.84
DUX1O43812 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.29■□□□□ 0.84
DUX1O43812 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.29■□□□□ 0.84
DUX1O43812 OR10C1-204ENST00000622521 1039 ntBASIC20.29■□□□□ 0.84
DUX1O43812 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
DUX1O43812 AC061975.6-201ENST00000579045 1553 ntBASIC20.29■□□□□ 0.84
DUX1O43812 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DUX1O43812 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DUX1O43812 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DUX1O43812 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DUX1O43812 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DUX1O43812 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.28■□□□□ 0.84
DUX1O43812 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
DUX1O43812 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DUX1O43812 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.28■□□□□ 0.84
DUX1O43812 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DUX1O43812 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DUX1O43812 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DUX1O43812 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DUX1O43812 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DUX1O43812 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.28■□□□□ 0.84
DUX1O43812 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.28■□□□□ 0.84
DUX1O43812 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DUX1O43812 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DUX1O43812 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DUX1O43812 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DUX1O43812 RBM17P2-201ENST00000616397 1405 ntBASIC20.27■□□□□ 0.84
DUX1O43812 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DUX1O43812 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.27■□□□□ 0.84
DUX1O43812 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
DUX1O43812 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DUX1O43812 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
DUX1O43812 AC069152.1-201ENST00000438030 544 ntBASIC20.27■□□□□ 0.84
DUX1O43812 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DUX1O43812 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.27■□□□□ 0.84
DUX1O43812 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.27■□□□□ 0.84
DUX1O43812 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
DUX1O43812 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
DUX1O43812 AC243732.1-201ENST00000612648 864 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms