Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 GDI2-206ENST00000456041 918 ntTSL 512.7□□□□□ -0.388e-24■□□□□ 9
DDX3XO00571 GDI2-202ENST00000380181 1408 ntTSL 1 (best) BASIC11.98□□□□□ -0.498e-24■□□□□ 9
DDX3XO00571 GDI2-204ENST00000418688 636 ntTSL 511.06□□□□□ -0.648e-24■□□□□ 9
DDX3XO00571 OXNAD1-207ENST00000606098 2288 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.792e-9■□□□□ 9
DDX3XO00571 GDI2-201ENST00000380127 584 ntTSL 39.5□□□□□ -0.898e-24■□□□□ 9
DDX3XO00571 GDI2-208ENST00000608581 634 ntTSL 39.23□□□□□ -0.938e-24■□□□□ 9
DDX3XO00571 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.042e-8■□□□□ 9
DDX3XO00571 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.922e-8■□□□□ 9
DDX3XO00571 CLK2-205ENST00000476983 1885 ntTSL 1 (best)21.22■□□□□ 0.992e-8■□□□□ 9
DDX3XO00571 CLK2-204ENST00000471047 701 ntTSL 310.52□□□□□ -0.732e-8■□□□□ 9
DDX3XO00571 RPS3A-203ENST00000505243 614 ntTSL 318.98■□□□□ 0.636e-32■□□□□ 9
DDX3XO00571 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.02■□□□□ 0.326e-32■□□□□ 9
DDX3XO00571 RPS3A-202ENST00000503002 480 ntTSL 314.17□□□□□ -0.146e-32■□□□□ 9
DDX3XO00571 RPS3A-207ENST00000508783 587 ntTSL 312.31□□□□□ -0.446e-32■□□□□ 9
DDX3XO00571 RPS3A-206ENST00000507485 1526 ntTSL 1 (best)8.98□□□□□ -0.976e-32■□□□□ 9
DDX3XO00571 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.146e-32■□□□□ 9
DDX3XO00571 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.42□□□□□ -1.226e-32■□□□□ 9
DDX3XO00571 RPS3A-214ENST00000515818 572 ntTSL 57.42□□□□□ -1.226e-32■□□□□ 9
DDX3XO00571 RPS3A-211ENST00000512797 686 ntTSL 26.94□□□□□ -1.36e-32■□□□□ 9
DDX3XO00571 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.57□□□□□ -1.526e-32■□□□□ 9
DDX3XO00571 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.76□□□□□ -1.656e-32■□□□□ 9
DDX3XO00571 RPS3A-213ENST00000515792 671 ntTSL 34.76□□□□□ -1.656e-32■□□□□ 9
DDX3XO00571 RPS3A-205ENST00000507327 674 ntTSL 24.58□□□□□ -1.686e-32■□□□□ 9
DDX3XO00571 SRP9-202ENST00000366838 540 ntTSL 2 BASIC12.03□□□□□ -0.481e-9■□□□□ 9
DDX3XO00571 VASP-208ENST00000589627 696 ntTSL 323.98■■□□□ 1.437e-29■□□□□ 9
DDX3XO00571 VASP-211ENST00000592139 424 ntTSL 322.96■■□□□ 1.277e-29■□□□□ 9
DDX3XO00571 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.6■■□□□ 1.051e-10■□□□□ 9
DDX3XO00571 UNG-203ENST00000446767 2016 ntTSL 1 (best)21.16■□□□□ 0.981e-10■□□□□ 9
DDX3XO00571 VASP-210ENST00000590603 388 ntTSL 220.92■□□□□ 0.947e-29■□□□□ 9
DDX3XO00571 VASP-202ENST00000586014 1725 ntTSL 520.76■□□□□ 0.917e-29■□□□□ 9
DDX3XO00571 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.841e-10■□□□□ 9
DDX3XO00571 STX7-204ENST00000475879 585 ntTSL 219.44■□□□□ 0.71e-10■□□□□ 9
DDX3XO00571 VASP-203ENST00000586619 655 ntTSL 219.11■□□□□ 0.657e-29■□□□□ 9
DDX3XO00571 UNG-204ENST00000539287 2234 ntTSL 518.79■□□□□ 0.61e-10■□□□□ 9
DDX3XO00571 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.427e-29■□□□□ 9
DDX3XO00571 STX7-203ENST00000448348 556 ntTSL 416.97■□□□□ 0.311e-10■□□□□ 9
DDX3XO00571 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.031e-10■□□□□ 9
DDX3XO00571 NCAPD2-202ENST00000382457 2844 ntTSL 511.48□□□□□ -0.571e-10■□□□□ 9
DDX3XO00571 NCAPD2-207ENST00000539084 4290 ntTSL 211.32□□□□□ -0.61e-10■□□□□ 9
DDX3XO00571 SGSH-206ENST00000571156 554 ntTSL 411.08□□□□□ -0.641e-10■□□□□ 9
DDX3XO00571 SNF8-214ENST00000515174 823 ntTSL 211.02□□□□□ -0.651e-10■□□□□ 9
DDX3XO00571 C5orf24-205ENST00000507390 269 ntTSL 25.56□□□□□ -1.521e-10■□□□□ 9
DDX3XO00571 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.39□□□□□ -1.551e-10■□□□□ 9
DDX3XO00571 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.011e-10■□□□□ 9
DDX3XO00571 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15□□□□□ -0.018e-81■□□□□ 9
DDX3XO00571 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.65■■□□□ 1.063e-14■□□□□ 8.9
DDX3XO00571 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC8.21□□□□□ -1.11e-6■□□□□ 8.9
DDX3XO00571 ARFGEF1-206ENST00000519436 571 ntTSL 321.63■■□□□ 1.051e-6■□□□□ 8.9
DDX3XO00571 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.41e-6■□□□□ 8.9
DDX3XO00571 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.36e-6■□□□□ 8.9
DDX3XO00571 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.08■■□□□ 1.936e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-215ENST00000487407 2098 ntTSL 226.29■■□□□ 1.86e-6■□□□□ 8.9
DDX3XO00571 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.9■■□□□ 1.746e-6■□□□□ 8.9
DDX3XO00571 COMTD1-206ENST00000491270 473 ntTSL 324.32■■□□□ 1.486e-6■□□□□ 8.9
DDX3XO00571 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.99■■□□□ 1.436e-6■□□□□ 8.9
DDX3XO00571 ANKRD17-210ENST00000561029 2717 ntTSL 523.61■■□□□ 1.376e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.68■■□□□ 1.226e-6■□□□□ 8.9
DDX3XO00571 FAM160B2-211ENST00000498344 917 ntTSL 222.25■■□□□ 1.156e-6■□□□□ 8.9
DDX3XO00571 COMTD1-203ENST00000469299 871 ntTSL 321.86■■□□□ 1.096e-6■□□□□ 8.9
DDX3XO00571 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.92■□□□□ 0.946e-6■□□□□ 8.9
DDX3XO00571 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.946e-6■□□□□ 8.9
DDX3XO00571 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.92■□□□□ 0.946e-6■□□□□ 8.9
DDX3XO00571 FAM160B2-202ENST00000427751 932 ntTSL 520.83■□□□□ 0.936e-6■□□□□ 8.9
DDX3XO00571 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.32■□□□□ 0.846e-6■□□□□ 8.9
DDX3XO00571 MUTYH-208ENST00000435155 904 ntTSL 520.2■□□□□ 0.826e-6■□□□□ 8.9
DDX3XO00571 MUTYH-239ENST00000534453 672 ntTSL 320.04■□□□□ 0.86e-6■□□□□ 8.9
DDX3XO00571 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.99■□□□□ 0.795e-8■□□□□ 8.9
DDX3XO00571 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.796e-6■□□□□ 8.9
DDX3XO00571 FAM160B2-208ENST00000488968 2702 ntTSL 219.95■□□□□ 0.786e-6■□□□□ 8.9
DDX3XO00571 COMTD1-207ENST00000494596 539 ntTSL 219.83■□□□□ 0.776e-6■□□□□ 8.9
DDX3XO00571 FAM160B2-203ENST00000450006 2846 ntTSL 1 (best)19.52■□□□□ 0.716e-6■□□□□ 8.9
DDX3XO00571 MUTYH-220ENST00000475516 1677 ntTSL 1 (best)19.14■□□□□ 0.656e-6■□□□□ 8.9
DDX3XO00571 MUTYH-219ENST00000474703 577 ntTSL 319.12■□□□□ 0.656e-6■□□□□ 8.9
DDX3XO00571 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.646e-6■□□□□ 8.9
DDX3XO00571 MUTYH-232ENST00000492494 998 ntTSL 518.46■□□□□ 0.556e-6■□□□□ 8.9
DDX3XO00571 MUS81-202ENST00000524647 1817 ntTSL 518.42■□□□□ 0.546e-6■□□□□ 8.9
DDX3XO00571 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.516e-6■□□□□ 8.9
DDX3XO00571 PTPN7-209ENST00000477554 1432 ntAPPRIS ALT2 TSL 218.18■□□□□ 0.51e-6■□□□□ 8.9
DDX3XO00571 WDR27-206ENST00000474018 951 ntTSL 217.96■□□□□ 0.476e-6■□□□□ 8.9
DDX3XO00571 MUTYH-213ENST00000462387 820 ntTSL 317.94■□□□□ 0.466e-6■□□□□ 8.9
DDX3XO00571 MUTYH-228ENST00000483642 1080 ntTSL 517.94■□□□□ 0.466e-6■□□□□ 8.9
DDX3XO00571 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.456e-6■□□□□ 8.9
DDX3XO00571 GNPTG-203ENST00000527076 2400 ntTSL 217.77■□□□□ 0.436e-6■□□□□ 8.9
DDX3XO00571 MKS1-209ENST00000580127 843 ntTSL 517.75■□□□□ 0.436e-6■□□□□ 8.9
DDX3XO00571 MUTYH-230ENST00000485484 810 ntTSL 317.56■□□□□ 0.46e-6■□□□□ 8.9
DDX3XO00571 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.03■□□□□ 0.326e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17■□□□□ 0.316e-6■□□□□ 8.9
DDX3XO00571 UBL4A-205ENST00000477777 629 ntTSL 216.91■□□□□ 0.36e-6■□□□□ 8.9
DDX3XO00571 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.86■□□□□ 0.296e-6■□□□□ 8.9
DDX3XO00571 MUTYH-225ENST00000481571 1742 ntTSL 1 (best)16.86■□□□□ 0.296e-6■□□□□ 8.9
DDX3XO00571 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.276e-6■□□□□ 8.9
DDX3XO00571 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.7■□□□□ 0.266e-6■□□□□ 8.9
DDX3XO00571 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.57■□□□□ 0.244e-11■□□□□ 8.9
DDX3XO00571 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.226e-6■□□□□ 8.9
DDX3XO00571 DEF6-202ENST00000444278 385 ntTSL 316.4■□□□□ 0.226e-6■□□□□ 8.9
DDX3XO00571 MUTYH-207ENST00000412971 772 ntTSL 316.23■□□□□ 0.196e-6■□□□□ 8.9
DDX3XO00571 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.196e-6■□□□□ 8.9
DDX3XO00571 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.186e-6■□□□□ 8.9
DDX3XO00571 PMM2-211ENST00000566540 1557 ntTSL 1 (best)16.17■□□□□ 0.186e-6■□□□□ 8.9
DDX3XO00571 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.175e-8■□□□□ 8.9
Retrieved 100 of 47,714 protein–RNA pairs in 4414.6 ms